FC929891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.595e-63 Identity = 116/167 (69.46%), Postives = 140/167 (83.83%), Query Frame = 3 Query: 237 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 + KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR + LREIASGRDLKKFL IAGLW+LSI+G NF+TL YI VLL TVP+ Y Sbjct: 65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAY 231
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.914e-63 Identity = 117/210 (55.71%), Postives = 153/210 (72.86%), Query Frame = 3 Query: 111 MAEHAPEHESADKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 MAE + ++SL+EKI+ A K+K++R+FGREKP+H VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWSNA T INK+ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI FV+LHTVP++Y Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLY 210
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.928e-62 Identity = 116/167 (69.46%), Postives = 138/167 (82.63%), Query Frame = 3 Query: 237 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 + K+K++RLFGRE+P+H + G GKPADIFLWRNKK+S GVLG AT W+LFELLEY+L+TL HISIL+LAVLFLWS+ASTFI+KSP IP V +PE VL+ AS LR EINR VLR+IASGRDLKKFL VIAGLW+LS VG+ CNF+TL YI VLL T+PV+Y Sbjct: 40 SLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLY 206
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.130e-62 Identity = 111/167 (66.47%), Postives = 140/167 (83.83%), Query Frame = 3 Query: 237 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 + KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL IAGLW+LSI+G +F+TL YI VLL TVP+ Y Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFY 227
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.750e-62 Identity = 111/167 (66.47%), Postives = 134/167 (80.24%), Query Frame = 3 Query: 237 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 +FKSK++RLFGREKP+H VLG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWSNA TFI+KS P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGLW+LSI+G+ NF+TLFY VLL T+PV+Y Sbjct: 44 SFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLY 210
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.676e-60 Identity = 107/167 (64.07%), Postives = 136/167 (81.44%), Query Frame = 3 Query: 237 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 A K+K++RLFGREKP+H VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL SNA F+NK+PP+IP + + E+ L SALR E+N+A +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI FV+LHTVP++Y Sbjct: 44 ALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLY 210
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.148e-45 Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 3 Query: 246 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 S+ RLF R+KPIHHVLG GK AD+ LWRNKKISA VL GATA+WVLFE + +H ++LVC+ +L + F+WSNAS F+N+S +P + LP+ F E A+ E+NR L L+++A +LK+FL + GLW+ ++VG+ CNF+T+ YI FV HT+PV+Y Sbjct: 40 SRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLY 203
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44 Identity = 83/162 (51.23%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 252 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L T +W+LF L+T +C SIL L + FLWSNA +NKSP + + +PEK +L+ ASA+ +E+N A A LR IA RD+K F+ + GLWL+S++GNW +F++L YI FVL+HTVP++Y Sbjct: 51 IYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLY 209
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33 Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 3 Query: 249 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 K +LF R++ IH + G GK ADI LWR KI+A ++ G + +W L E++EY+ ITL+CH S+ S+ F+WS AS F+N P IP V L E + A + N+ L L ++A GRD F L+++SI+G + NFV L +I FV + T+PV+Y Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMY 181
BLAST of FC929891 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 57/160 (35.62%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 258 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIY 737 +LF R++ IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +L L++LFLWS +++ +N+ P +P + E E + LR +N+ L V +IA RD + + V L+LLS++G+ +F TL + +++ TVP Y Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFY 166 The following BLAST results are available for this feature:
BLAST of FC929891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929891 ID=FC929891; Name=FC929891; organism=Citrus clementina; type=EST; length=737bpback to top |