FC929897

Overview
NameFC929897
Unique NameFC929897
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10479 contig Ccv1_Contig10479:130..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5_DROME (Apoptosis inhibitor 5 homolog OS=Drosophila melanogaster GN=Aac11 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26
Identity = 69/187 (36.90%), Postives = 115/187 (61.50%), Query Frame = 2
Query:  140 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEENGRHITDLIKK 697
            IE+LY+  E L+EA DK S++V +Y+ I++A K + K K+LA+Q I  FFK FPDL+  A+DA  DL E+++  +R QAI+ LP  C+   +   ++ D L QLL  ++  E   V+ +L+++++ D K+S+  LF+ I + DE +     RE+ L FI  K+  +   ++  + E+  +I + IKK
Sbjct:    4 IERLYKCYEILSEAGDKISEHVDEYKEILKAVKGTSKEKRLASQFIGNFFKHFPDLADTAIDAQFDLCEDDDTQIRRQAIKDLPKLCQGNADATIRVGDTLAQLLILDDPTELQQVNNSLLAIIKLDTKSSIAGLFQQISTGDETT-----RERCLKFIATKLLTMGPTVITKEIED--YIVEEIKK 183          
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5A_XENLA (Apoptosis inhibitor 5-A OS=Xenopus laevis GN=api5-A PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24
Identity = 68/177 (38.42%), Postives = 104/177 (58.76%), Query Frame = 2
Query:  140 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEN 667
            +E+LY     L +AKD   Q+   Y+ II+  K   K K+LAAQ IP+FFK FPDLS  A++A LDL E+E++ +R QAI+ L  F   T E L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E L  + ++
Sbjct:    4 VEELYRSYGILADAKDDVGQHKSAYQVIIDGVKGGAKEKRLAAQFIPKFFKHFPDLSDSALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLATKMKTLPEETLTKEVDD 173          
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5_PONAB (Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 66/176 (37.50%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  140 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEE 664
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L  + E
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVLTKEVE 172          
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5_MOUSE (Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 66/176 (37.50%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  140 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEE 664
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L  + E
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVLTKEVE 172          
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5_HUMAN (Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 66/176 (37.50%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  140 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEE 664
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L  + E
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVLTKEVE 172          
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5_CHICK (Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 65/176 (36.93%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  140 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEE 664
            +E+LY     L +A + +   KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T + L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L  + E
Sbjct:    4 VEELYRNYGILADATETAGQHKDAYQVILDGVKGGAKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGDNLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPEEVLTKEVE 172          
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5B_XENLA (Apoptosis inhibitor 5-B OS=Xenopus laevis GN=api5-B PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 66/177 (37.29%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  140 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEN 667
            +E+LY     L +AKD   Q+   Y+ I++  K   K K+LAAQ IP+FFK FPDLS  A++A LDL E+E++ +R QAI+ L  F   T E L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  ++L  + ++
Sbjct:    4 VEELYRNYGILADAKDDVGQHKSAYQVILDGVKGGPKEKRLAAQFIPKFFKHFPDLSDAALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDVVRERAIKFLATKMKTLPEDILTKEVDD 173          
BLAST of FC929897 vs. ExPASy Swiss-Prot
Match: API5_DICDI (Apoptosis inhibitor 5 homolog OS=Dictyostelium discoideum GN=api5 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 51/180 (28.33%), Postives = 98/180 (54.44%), Query Frame = 2
Query:  101 ISPMTDPSDEAKQIEKLYEFGERLNEAKDKSQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIE--EEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPL 634
            + P    +DE   I   Y+   +L+       + K +  IIE +  + + K+L+ Q I ++FK FP L  +A+D  +DL +  +E++ +RV A++ +P  C+D P++++K+VDIL QLL  +  VE +    +L+ L + +   +L +    + S +    D+     +LSF+++ + PL
Sbjct:   35 VVPQVVRNDE--YINTFYDIANKLDTNPSFPDDDKLFSKIIELSSKTKQTKKLSPQFISKYFKRFPTLQEKAIDCLIDLFDSSDEDVIMRVNALKAIPTICRDNPDHIAKLVDILSQLLNTDSKVEAEHTKNSLIELYKLNSVTTLNSFLTFLESEESSMEDQPASSTLLSFLKESIIPL 212          
The following BLAST results are available for this feature:
BLAST of FC929897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
API5_DROME1.098e-2636.90Apoptosis inhibitor 5 homolog OS=Drosophila melano... [more]
API5A_XENLA1.028e-2438.42Apoptosis inhibitor 5-A OS=Xenopus laevis GN=api5-... [more]
API5_PONAB2.990e-2437.50Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2... [more]
API5_MOUSE2.990e-2437.50Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2... [more]
API5_HUMAN2.990e-2437.50Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1... [more]
API5_CHICK2.990e-2436.93Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=... [more]
API5B_XENLA5.101e-2437.29Apoptosis inhibitor 5-B OS=Xenopus laevis GN=api5-... [more]
API5_DICDI4.940e-1928.33Apoptosis inhibitor 5 homolog OS=Dictyostelium dis... [more]
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Properties
Property NameValue
Genbank descriptionC34001F04EF PostHarvC1 Citrus clementina cDNA clone C34001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929897 ID=FC929897; Name=FC929897; organism=Citrus clementina; type=EST; length=701bp
GTATTTTCTCGCATTCTCCACTCTTCCATTCATAAATCATATAATCCATT
CCTCCTCGAGTGAAATTCTCTCTCTACCAAAACGCAAAAAAAATAAAAAA
ATTTCCCCAATGACTGACCCCTCAGACGAGGCCAAGCAAATCGAGAAGCT
CTACGAGTTCGGCGAACGACTCAACGAGGCCAAGGACAAGTCTCAGAATG
TGAAGGACTACGAGGGGATAATTGAAGCTGCGAAAACGAGTCTTAAAGCT
AAGCAATTGGCTGCTCAGTTGATTCCTAGGTTTTTCAAGTTCTTTCCTGA
CCTATCCAGCCGCGCTGTTGATGCGCATCTCGATTTGATCGAGGAAGAAG
AGCTCGGAGTTCGAGTGCAAGCAATTAGGGGACTCCCTCTTTTCTGCAAG
GATACGCCGGAGTATCTTTCTAAAATTGTTGACATTCTAGTACAACTCCT
TGCAGCTGAGGAAATTGTGGAGCGTGATGCTGTGCACAAAGCACTTATGT
CCCTTCTGAGGCAAGATGTGAAAGCTTCTTTGACTGCCTTATTTAAGCAC
ATTGGGAGTGTCGATGAACCAAGTACAGATGAGTTTATACGTGAGAAGGT
TCTAAGCTTTATAAGAGATAAGGTTTTCCCTCTTAAAGCTGAACTCTTGA
AGCCTCAGGAGGAAAATGGAAGGCATATAACTGATTTAATAAAAAAAGTT
T
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