FC929899

Overview
NameFC929899
Unique NameFC929899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14670 contig Ccv1_Contig14670:723..1408. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 5.811e-118
Identity = 196/228 (85.96%), Postives = 207/228 (90.79%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E ELWWGKGSPNIEMDEHTF+VNRERAVDYLNSL+KVFVNDQ+LNWDP+NR+KVRIVSARAYHSLFMHNMCIRPT EELE+FGTPDFTIYNAGQFPCNRYTHYMTSSTS+DLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKR+ILSLHSGCNMGKDGDVA               DHNRYLIGDDEHCW + GVSNIEGGCYAKC+DLSREKEPDIWNA +FG V
Sbjct:  203 EDELWWGKGSPNIEMDEHTFMVNRERAVDYLNSLEKVFVNDQYLNWDPENRIKVRIVSARAYHSLFMHNMCIRPTQEELESFGTPDFTIYNAGQFPCNRYTHYMTSSTSVDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRRILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEGGCYAKCVDLSREKEPDIWNAIKFGTV 430          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.096e-116
Identity = 195/228 (85.53%), Postives = 205/228 (89.91%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E ELWWGKGSPNIEMDEHTFL+NRERAVDYLNSLDKVFVNDQFLNWDP+NR+KVRIVSARAYHSLFMHNMCIRPT  ELE+FGTPDFTIY+AGQFPCNRYTHYMTSSTSID+NL R+EMVILGTQYAGEMKKGLFS+MHYLMP RQILSLHSGCNMGK+GDVA               DHNRYLIGDDEHCW DNGVSNIEGGCYAKCIDLSREKEPDIWNA +FG V
Sbjct:  202 EKELWWGKGSPNIEMDEHTFLINRERAVDYLNSLDKVFVNDQFLNWDPENRIKVRIVSARAYHSLFMHNMCIRPTAGELEDFGTPDFTIYHAGQFPCNRYTHYMTSSTSIDMNLDRKEMVILGTQYAGEMKKGLFSLMHYLMPMRQILSLHSGCNMGKNGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTV 429          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.440e-109
Identity = 186/226 (82.30%), Postives = 196/226 (86.73%), Query Frame = 2
Query:    8 ELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            +LWWGKGSPNIEMDE TFL+NRERAVDYLNSL KV    Q LNWDP+NR+KVRI+SARAYHSLFMHNMCIRPT EELE+FGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVI+GTQYAGEMKKGLF VMHYLMPKR ILSLHSGCNMGKDGDVA               DHN  LIGDDEHCW DNGVSNIEGGCYAKCIDL++EKEPDIWNA +FG V
Sbjct:  201 DLWWGKGSPNIEMDEKTFLINRERAVDYLNSL-KVVRQRQLLNWDPENRIKVRIISARAYHSLFMHNMCIRPTDEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVIMGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNGLLIGDDEHCWSDNGVSNIEGGCYAKCIDLAQEKEPDIWNAIKFGTV 425          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.098e-108
Identity = 180/226 (79.65%), Postives = 198/226 (87.61%), Query Frame = 2
Query:    8 ELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            ELWWGKGSPNIEMDE  F++NRERA+D+LNSLDKV+VNDQFLNWDP+NR+KVRI+++RAYH+LFMHNMCIRPT EELE FGTPDFTIYNAG+FP NRY +YMTSSTSI+++LARREMVILGTQYAGEMKKGLF VMHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCW DNGVSNIEGGCYAKCIDLS+EKEPDIWNA  FG V
Sbjct:  158 ELWWGKGSPNIEMDERQFVINRERALDFLNSLDKVYVNDQFLNWDPENRIKVRIITSRAYHALFMHNMCIRPTEEELETFGTPDFTIYNAGEFPANRYANYMTSSTSINISLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSKEKEPDIWNAITFGTV 383          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.874e-108
Identity = 180/226 (79.65%), Postives = 199/226 (88.05%), Query Frame = 2
Query:    8 ELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            ELWWGKGSPNIEMDE  F++NRERA+DYLNSLDKV+VNDQFLNWD +NR+KVRI+++RAYH+LFMHNMCIRPT EELE+FGTPDFTIYNAG+FP NRY +YMTSSTSI+++LARREMVILGTQYAGEMKKGLF VMHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCW DNGVSNIEGGCYAKCIDLS+EKEPDIWNA +FG V
Sbjct:  160 ELWWGKGSPNIEMDERQFVINRERALDYLNSLDKVYVNDQFLNWDSENRIKVRIITSRAYHALFMHNMCIRPTEEELESFGTPDFTIYNAGEFPANRYANYMTSSTSINISLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFGTV 385          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA2_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salinibacter ruber (strain DSM 13855) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.310e-77
Identity = 131/228 (57.46%), Postives = 170/228 (74.56%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E ++WWG    N+E+D+HTF +N+ERA DYLN+  +++V D F  WDP +R+KVRI+ +R YH+LFMHNM IRP+ EEL +FG PDF IYNAG+FP NR T +M+S TS+DL+   +EMVILGT+YAGEMKKG+F+VMHYLMPK+ +LS+H   N G +GDV+               D NR LIGDDEHCW D+GV NIEGGCYAK + LS E+EP+I+NA ++G V
Sbjct:   68 EDDIWWGP--INMEIDDHTFEINKERAQDYLNTRQRIYVMDGFAGWDPAHRLKVRIICSRPYHALFMHNMLIRPSQEELASFGEPDFVIYNAGEFPANRQTKHMSSKTSVDLSFENQEMVILGTEYAGEMKKGVFTVMHYLMPKKDVLSMHCSANEGDEGDVSLFFGLSGTGKTTLSADPNRKLIGDDEHCWSDDGVFNIEGGCYAKAVGLSEEEEPEIYNAIRYGTV 293          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_DICDI (Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyostelium discoideum GN=pckA PE=1 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.891e-76
Identity = 137/230 (59.57%), Postives = 171/230 (74.35%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTP-EELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGK-DGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            + ++WWG    NI MD+ +F++NRERA+DYLN+ +K++V D +  WDP+ R+KVR++ ARAYH+LFMHNM IRP   EEL NFG PD+TIYNAGQFP NRYT  M+SS+SI ++ AR+EMVILGTQYAGEMKKG+ ++M YLMPK  +L LHS CN  + +GD                 D NR LIGDDEH W D G  NIEGGCYAKCIDLSREKEP+I++A +FGAV
Sbjct:   99 QDDIWWGP--VNIAMDDLSFMINRERAIDYLNTQEKIYVIDGYAGWDPKYRIKVRVICARAYHALFMHNMLIRPANREELRNFGEPDYTIYNAGQFPANRYTKGMSSSSSIAIDFARKEMVILGTQYAGEMKKGILTIMMYLMPKMGVLPLHSSCNQARNNGDTTLFFGLSGTGKTTLSADINRELIGDDEHVWTDTGCFNIEGGCYAKCIDLSREKEPEIFDAIKFGAV 326          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_CANAL (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida albicans GN=PCK1 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.038e-74
Identity = 135/229 (58.95%), Postives = 168/229 (73.36%), Query Frame = 2
Query:    5 HELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            H +WWG    N ++ E T+ ++R RA+DYL + +K+FV D +  WDP  R+KVRI+ ARAYH+LFM NM IRPT EEL+NFG PDFTIYNAGQFP N +T  MTS+TS+++N    EMVILGT+YAGEMKKG+F+VM YLMP K ++L+LHS CN G + GDV                D  R LIGDDEHCW DNGV NIEGGCYAKC+DLS EKEP+I+N+ +FGA+
Sbjct:   90 HNIWWGP--VNKQVGELTWEISRSRALDYLRTREKLFVVDAYAGWDPSYRIKVRIICARAYHALFMTNMLIRPTEEELKNFGEPDFTIYNAGQFPANIHTKGMTSATSVEINFKDMEMVILGTEYAGEMKKGIFTVMFYLMPIKHKVLTLHSSCNQGVEKGDVTLFFGLSGTGKTTLSADPQRKLIGDDEHCWSDNGVFNIEGGCYAKCLDLSAEKEPEIFNSIKFGAI 316          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.826e-72
Identity = 133/227 (58.59%), Postives = 162/227 (71.37%), Query Frame = 2
Query:   11 LWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            +WWG    N    E T+ +NRERA DYL + + ++V D F  WDP+ R+KVR+V ARAYH+LFM NM IRPT EEL NFG PDFT++NAGQFP N  T  MTS T+I++N    EMVILGT+YAGEMKKG+F+VM YLMP    +L+LHS CN G K+GDV                D +R LIGDDEHCW D GV NIEGGCYAKCI+LSREKEP+I++A +FG+V
Sbjct:   83 VWWGP--VNKPCSERTWAINRERAADYLRTRETLYVVDAFAGWDPKYRIKVRVVCARAYHALFMTNMLIRPTEEELANFGEPDFTVWNAGQFPANARTQDMTSKTTIEINFKAMEMVILGTEYAGEMKKGIFTVMFYLMPVHHNVLTLHSSCNQGIKNGDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDEGVFNIEGGCYAKCINLSREKEPEIFDAIRFGSV 307          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.330e-71
Identity = 133/229 (58.08%), Postives = 163/229 (71.18%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E+++WWG    N  M    + +NRERAVDYLN+ ++++V D +  WD + R++VR+V ARAYH+LFM NM IRP  EELE+F  PD+TIYNAG FP NRYT  M+SSTS+ +N A +EMVILGT+YAGEMKKG+F+VM Y  P K  IL+LHS  N GKDGDV                D NR LIGDDEHCW D GV NIEGGCYAK I LS EKEPDI+NA ++G+V
Sbjct:   99 ENDIWWGP--VNKPMSPEVWKINRERAVDYLNTRNRIYVVDGYAGWDEKYRIRVRVVCARAYHALFMRNMLIRPPREELEHFH-PDYTIYNAGSFPANRYTEGMSSSTSVAINFAEKEMVILGTEYAGEMKKGIFTVMFYEGPVKHNILTLHSSANEGKDGDVTLFFGLSGTGKTTLSADPNRRLIGDDEHCWSDRGVFNIEGGCYAKTIGLSAEKEPDIFNAIRYGSV 324          
The following BLAST results are available for this feature:
BLAST of FC929899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_ARATH5.811e-11885.96Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_CUCSA1.096e-11685.53Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_MAIZE6.440e-10982.30Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA1_UROPA1.098e-10879.65Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA2_UROPA1.874e-10879.65Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA2_SALRD1.310e-7757.46Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salin... [more]
PCKA_DICDI1.891e-7659.57Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyos... [more]
PCKA_CANAL1.038e-7458.95Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_CANGA2.826e-7258.59Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_NEUCR5.330e-7158.08Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]

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Properties
Property NameValue
Genbank descriptionC34001F06EF PostHarvC1 Citrus clementina cDNA clone C34001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929899 ID=FC929899; Name=FC929899; organism=Citrus clementina; type=EST; length=686bp
GGAGCATGAACTTTGGTGGGGAAAGGGTTCACCTAACATTGAAATGGACG
AGCACACATTTTTGGTGAACAGAGAAAGGGCTGTTGATTACTTGAATTCT
TTGGACAAAGTTTTTGTGAATGATCAATTCTTGAACTGGGATCCACAGAA
CCGAGTCAAAGTCAGAATTGTTTCTGCAAGGGCTTACCATTCTTTGTTCA
TGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTGGAGAATTTCGGT
ACTCCGGACTTCACTATATACAATGCTGGACAGTTCCCGTGTAATCGTTA
TACTCACTACATGACATCCTCCACTAGCATAGACCTTAATCTTGCTAGGA
GGGAAATGGTCATCCTCGGCACACAGTACGCCGGGGAAATGAAGAAGGGT
CTTTTCAGTGTTATGCATTATCTCATGCCTAAACGTCAAATCCTCTCCCT
TCATTCTGGCTGCAATATGGGAAAAGATGGAGATGTTGCCCTCTTCTTTG
GATTGTCAGGTACTGGAAAGACAACACTGTCTACTGATCACAATCGATAT
CTGATTGGAGACGATGAACACTGTTGGGGTGACAATGGTGTGTCAAACAT
TGAGGGTGGTTGCTATGCCAAGTGCATTGATCTCTCAAGGGAGAAGGAGC
CTGATATCTGGAATGCCATNCAGTTTGGCGCTGTGT
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