FC929907

Overview
NameFC929907
Unique NameFC929907
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15053 contig Ccv1_Contig15053:1..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_CICAR (Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.278e-92
Identity = 155/181 (85.64%), Postives = 166/181 (91.71%), Query Frame = 3
Query:   96 MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 638
            MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF+ LGVEF KKPD GKMKG+AFIKDPD YWIE+FD KTIG +
Sbjct:    1 MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGNV 181          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_BRAJU (Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.793e-90
Identity = 153/182 (84.07%), Postives = 165/182 (90.66%), Query Frame = 3
Query:  102 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIGGS 647
            +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP  GKMK +AFIKDPD YWIEIFDLKTIG   G+
Sbjct:    2 ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_ARATH (Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 8.896e-90
Identity = 153/177 (86.44%), Postives = 163/177 (92.09%), Query Frame = 3
Query:  102 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIG 632
            +SE +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP+ GKMK +AFIKDPD YWIEIFDLKTIG
Sbjct:    2 ASEARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 178          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_SOYBN (Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.588e-89
Identity = 148/179 (82.68%), Postives = 164/179 (91.62%), Query Frame = 3
Query:  102 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 638
            ++EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDD YKACERF+ LGVEF KKP+ GKMKG+AFIKDPD YWIEIFD KTIG +
Sbjct:    2 AAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 180          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 9.206e-87
Identity = 147/182 (80.77%), Postives = 162/182 (89.01%), Query Frame = 3
Query:  102 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIGGS 647
            +SE K+SP+NNPGLH   DEAT GYF+QQTMFRIKDPKVSL+FYS+VLGMSLLKRLDFPEMKFSLYF+GYEDTASAP+DPV+RT WTF + +T+ELTHNWGTESDP+F GYHNGNSEPRGFGHIG+TVDDVYKACERFE LGVEF KKP  GKMKG+AFIKDPD YWIEIFD K I    GS
Sbjct:    2 ASESKDSPSNNPGLHATPDEATKGYFLQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFVKKPLDGKMKGIAFIKDPDGYWIEIFDTKIIKDAAGS 183          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_MOUSE (Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 229.95 bits (585), Expect = 9.594e-60
Identity = 106/161 (65.84%), Postives = 126/161 (78.26%), Query Frame = 3
Query:  156 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 638
            D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GKMKG+AFI+DPD YWIEI +   I  I
Sbjct:   24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_RAT (Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 1.636e-59
Identity = 103/154 (66.88%), Postives = 124/154 (80.52%), Query Frame = 3
Query:  156 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFD 617
            D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RFE LGV+F KKPD GKMKG+AF++DPD YWIEI +
Sbjct:   24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILN 176          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_MACFA (Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 2.889e-56
Identity = 98/154 (63.64%), Postives = 120/154 (77.92%), Query Frame = 3
Query:  156 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFD 617
            D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P D  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RFE LGV+F KKPD GKMKG+AFI+DPD YWIEI +
Sbjct:   24 DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_HUMAN (Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4)

HSP 1 Score: 217.624 bits (553), Expect = 4.927e-56
Identity = 98/154 (63.64%), Postives = 120/154 (77.92%), Query Frame = 3
Query:  156 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFD 617
            D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GKMKG+AFI+DPD YWIEI +
Sbjct:   24 DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176          
BLAST of FC929907 vs. ExPASy Swiss-Prot
Match: LGUL_PSEAE (Lactoylglutathione lyase OS=Pseudomonas aeruginosa GN=gloA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.913e-45
Identity = 93/169 (55.03%), Postives = 109/169 (64.50%), Query Frame = 3
Query:  135 PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIG 641
            PG+    D  T  Y    TM R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL        P    +R  +TFG+ + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D+  ACERFE LGV F K  D G MK VAFI DPD YW+EI      G++G
Sbjct:    9 PGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMG 174          
The following BLAST results are available for this feature:
BLAST of FC929907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
LGUL_CICAR7.278e-9285.64Lactoylglutathione lyase OS=Cicer arietinum PE=2 S... [more]
LGUL_BRAJU1.793e-9084.07Lactoylglutathione lyase OS=Brassica juncea GN=GLY... [more]
LGUL_ARATH8.896e-9086.44Lactoylglutathione lyase OS=Arabidopsis thaliana G... [more]
LGUL_SOYBN2.588e-8982.68Lactoylglutathione lyase OS=Glycine max GN=GLXI PE... [more]
LGUL_SOLLC9.206e-8780.77Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]
LGUL_MOUSE9.594e-6065.84Lactoylglutathione lyase OS=Mus musculus GN=Glo1 P... [more]
LGUL_RAT1.636e-5966.88Lactoylglutathione lyase OS=Rattus norvegicus GN=G... [more]
LGUL_MACFA2.889e-5663.64Lactoylglutathione lyase OS=Macaca fascicularis GN... [more]
LGUL_HUMAN4.927e-5663.64Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 P... [more]
LGUL_PSEAE3.913e-4555.03Lactoylglutathione lyase OS=Pseudomonas aeruginosa... [more]

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Properties
Property NameValue
Genbank descriptionC34001G02EF PostHarvC1 Citrus clementina cDNA clone C34001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929907 ID=FC929907; Name=FC929907; organism=Citrus clementina; type=EST; length=692bp
GAGAGCCACCATAAAAACTTGGTCACCCCCTCGGATTTGACTTTACTCGC
TACTCACAACGGTCAAAGGCTTCGAATCGATTTCGGTTGCTTTCAATGGC
TTCCTCGGAGCCCAAAGAATCCCCCGCTAACAATCCGGGTCTTCACACCG
CCCGTGATGAAGCTACCAACGGATACTTCATGCAACAAACGATGTTTCGA
ATTAAGGACCCCAAAGTTAGTCTTGATTTCTATTCTCGTGTGTTGGGCAT
GTCGCTACTAAAGAGGTTGGATTTTCCAGAAATGAAATTTAGCCTATACT
TTTTGGGCTATGAGGATACTGCATCAGCTCCAGCTGACCCTGTTGATAGA
ACTGTTTGGACTTTTGGGAAGCCGGCTACAATTGAGCTGACTCATAACTG
GGGAACAGAAAGTGATCCCGACTTCAAAGGTTATCACAATGGGAATTCAG
AACCCCGTGGCTTTGGGCACATCGGCATCACTGTTGATGATGTATATAAG
GCATGTGAGAGGTTTGAACGTCTAGGGGTGGAATTTGCAAAGAAACCAGA
TGGTGGAAAAATGAAAGGCGTAGCATTCATTAAAGACCCTGATGACTATT
GGATTGAAATCTTTGACCTCAAAACAATTGGAAAAATTGGCGGTAGCACT
TGATATGACATTGCTCACTCAGGNAAGGCGGGATCCATTCAT
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