FC929923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: WD82B_XENLA (WD repeat-containing protein 82-B OS=Xenopus laevis GN=wdr82-B PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.427e-52 Identity = 98/216 (45.37%), Postives = 149/216 (68.98%), Query Frame = 2 Query: 38 ELDDETVRSMAMAAIFSDFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 682 +L D +RS +A +F + KIN DF + ++++SDDDS+ LYD K +T Y KK+G D + +TH ++V+ Y+ + +++RYLS++DN+ +RYF GH +RV+SL MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +LL+T Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVV----YSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVSLSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTALKFSNDGKLILLST 213
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: WDR82_MOUSE (WD repeat-containing protein 82 OS=Mus musculus GN=Wdr82 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.862e-52 Identity = 96/216 (44.44%), Postives = 149/216 (68.98%), Query Frame = 2 Query: 38 ELDDETVRSMAMAAIFSDFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 682 +L D +RS +A +F + KIN DF + ++++SDDDS+ LYD K +T Y KK+G D + +TH ++V+ Y+ + +++RYLS++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVV----YSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: WDR82_HUMAN (WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.862e-52 Identity = 96/216 (44.44%), Postives = 149/216 (68.98%), Query Frame = 2 Query: 38 ELDDETVRSMAMAAIFSDFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 682 +L D +RS +A +F + KIN DF + ++++SDDDS+ LYD K +T Y KK+G D + +TH ++V+ Y+ + +++RYLS++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVV----YSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: WDR82_CHICK (WD repeat-containing protein 82 OS=Gallus gallus GN=WDR82 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.288e-51 Identity = 96/216 (44.44%), Postives = 149/216 (68.98%), Query Frame = 2 Query: 38 ELDDETVRSMAMAAIFSDFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 682 +L D +RS +A +F + KIN DF + ++++SDDDS+ LYD K +T Y KK+G D + +TH ++V+ Y+ + +++RYLS++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVV----YSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: WDR82_XENTR (WD repeat-containing protein 82 OS=Xenopus tropicalis GN=wdr82 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51 Identity = 96/216 (44.44%), Postives = 149/216 (68.98%), Query Frame = 2 Query: 38 ELDDETVRSMAMAAIFSDFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 682 +L D +RS +A +F + KIN DF + ++++SDDDS+ LYD K +T Y KK+G D + +TH ++V+ Y+ + +++RYLS++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVV----YSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTALKFSNDGKLILMST 213
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: WDR82_DANRE (WD repeat-containing protein 82 OS=Danio rerio GN=wdr82 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.870e-51 Identity = 95/216 (43.98%), Postives = 149/216 (68.98%), Query Frame = 2 Query: 38 ELDDETVRSMAMAAIFSDFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 682 +L D +RS +A +F + KIN DF + ++++SDDDS+ LYD K +T Y KK+G D + +TH ++V+ Y+ + +++RYLS++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+D RS+DKGPF TF + + T E +KFSNDGK +L++T Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVV----YSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKLQYERTCEWTGLKFSNDGKLILVST 213
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: WD82A_XENLA (WD repeat-containing protein 82-A OS=Xenopus laevis GN=wdr82-A PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50 Identity = 94/216 (43.52%), Postives = 147/216 (68.06%), Query Frame = 2 Query: 38 ELDDETVRSMAMAAIFSDFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 682 +L D +RS +A +F + KIN DF + ++++SDDDS+ LYD K +T Y KK+G D + +TH ++V+ Y+ + +++RYLS++DN+ +RYF GH +RV++L MSPV+D+F+S SLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFS DGK +L++T Sbjct: 2 KLTDGVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVV----YSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISASLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTSLKFSQDGKLILMST 213
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: SWD2_SCHPO (Set1 complex component swd2 OS=Schizosaccharomyces pombe GN=swd2 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 2 Query: 89 DFGGKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVI-CSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFA-VAMEAGAIKLFDSRSYDKGPFD----TFLVGGDTAEVCDIKFSNDGKSMLLTT 682 +F G+I SL F +L + + DD+++LY+ + K +K+ KK+GA FTHH +S+I STK + ++RYL + NR LRYF GHK+ V S+ +SP +++F+S SLD+++R+WDLR CQG+L + AFD GL+FA V+ I L++ +S+D PF TFL + +++FS DGK +LLTT Sbjct: 24 NFVGEITSLSFDDSGELCLASCTDDTLQLYNCISGKFVKSLASKKYGAHLGRFTHHSNSLIHASTKED-----NTVRYLDVVTNRYLRYFPGHKQTVTSIDVSPADETFLSASLDNTIRLWDLRSPNCQGLLNVSSPVVAAFDATGLIFASVSERKYKISLYNIKSFDARPFQDIPLTFL--PPHVRIANVEFSTDGKYLLLTT 220
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: SWD2_YEAST (COMPASS component SWD2 OS=Saccharomyces cerevisiae GN=SWD2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 72/200 (36.00%), Postives = 113/200 (56.50%), Query Frame = 2 Query: 98 GKINSLDFHRKDDLLVTASDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVI-CSTKYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDT-AEVCDIKFSNDGKSMLLTTTI 688 G + SL+F L+T+S +D+++LY K + T KK+G FTH + I ST N D ++YL++ N+ LRYF GH V L M+PVND+F+S S D SVR+WDL+++ Q I+ +A+D GLVFA+ E I L++ + +GPF + T ++ ++FSN+GK +L+ ++I Sbjct: 28 GPVTSLNFDDNGQFLLTSSSNDTMQLYSATNCKFLDTIASKKYGCHSAIFTHAQNECIYSSTMKNFD-----IKYLNLETNQYLRYFSGHGALVNDLKMNPVNDTFLSSSYDESVRLWDLKISKPQVIIPSLVPNCIAYDPSGLVFALGNPENFEIGLYNLKKIQEGPFLIIKINDATFSQWNKLEFSNNGKYLLVGSSI 222
BLAST of FC929923 vs. ExPASy Swiss-Prot
Match: YIQ4_SCHPO (Uncharacterized WD repeat-containing protein C824.04 OS=Schizosaccharomyces pombe GN=SPAC824.04 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25 Identity = 79/231 (34.20%), Postives = 124/231 (53.68%), Query Frame = 2 Query: 41 LDDETVRSMAMAAIFSD--FGGKINSLDFHRKDDLLVTA-SDDDSVRLYDIVGAKLIKTTYHKKHGADCVCFTHHPSSVICST-KYNLDSTGESLRYLSMYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-CQGILRLRGRPTVAFDQQGLVFAVAMEA-GAIKLFDSRSYDKGPFDTFLVGGD-----------TAEVCDIKFSNDGKSMLLTT 682 +D + S+ A F D G INS+D+ + + T S DD+V++YD + K + T + G + FTHH +++ ST K N D ++Y+S+YDN+ + YF GH + V S+ +SP+ D F+S + D ++++W + ++ C G L L A+D GLVFAVA + I L+D R+Y PF TF + E ++FSNDGK +LL+T Sbjct: 1 MDIGILSSLKPAQSFRDNSLGSFINSIDYSDSGEYVATTCSADDTVQIYDALDPKQVHTITCFETGIEVARFTHHDHNLLLSTTKGNKD-----IQYVSIYDNKRISYFSGHTDIVSSIEVSPIEDQFVSTANDKTLKLWKMNQSSRCLGNLDLPSLGIPAYDPTGLVFAVACHSLSRIFLYDVRNYGSDPFSTFTIDDSRYLSRFSFPPMMPEWKHMEFSNDGKCILLST 226 The following BLAST results are available for this feature:
BLAST of FC929923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929923 ID=FC929923; Name=FC929923; organism=Citrus clementina; type=EST; length=702bpback to top |