FC929928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929928 vs. ExPASy Swiss-Prot
Match: NDH1_YEAST (External NADH-ubiquinone oxidoreductase 1, mitochondrial OS=Saccharomyces cerevisiae GN=NDE1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 147 DASPSTVQVTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEMQLF 617 +A+PST QV Q S P + K +V+LGSGW L+K +DT+LY+VV VSPRN+ +FTPLL ST VGT+E +S+ EP+ I E +++ + +D +N + ++ + + YD LV+ +GA+ +TFG GV E F Sbjct: 93 EANPST-QVPQ-SDTFPNGSKRKT-LVILGSGWGSVSLLKNLDTTLYNVVVVSPRNYFLFTPLLPSTPVGTIELKSIVEPVRTIARRSHGE--VHYYEAEAYDVDPENKTIKVKSSAKN----NDYDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSF 240
BLAST of FC929928 vs. ExPASy Swiss-Prot
Match: NDH_DICDI (Probable NADH dehydrogenase OS=Dictyostelium discoideum GN=DDB_G0270104 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20 Identity = 55/165 (33.33%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 111 NLILTCLSHFTTDASPSTVQVTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE 605 NLI+ ++ + + S+++ K E ++++LG GW +K +++ YD+ +SPRNH +FTPLL S+ VGTLEFRS+AEP+ +R+ + ++ A + + N + V +P F++ YDKLVI +G+ +TFGI GV+E Sbjct: 5 NLIIRGRNYISDHLTKSSLEKAIIRRQKRGKVIENEKLIILGCGWGSYSFLKNLNSIKYDITVISPRNHFLFTPLLTSSAVGTLEFRSIAEPV-----RTTRDINEFKYIQ--ASVTSINPENNSVLVKSTFHNEKP--FEMKYDKLVIGVGSRNNTFGIKGVEE 160
BLAST of FC929928 vs. ExPASy Swiss-Prot
Match: NDH2_YEAST (External NADH-ubiquinone oxidoreductase 2, mitochondrial OS=Saccharomyces cerevisiae GN=NDE2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 129 LSHFTTDASPSTVQVTQYSGLGPTK--------AN--EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV 599 L+ +TT A V Y P K AN +K +V+LG+GW L+K +DTSLY+V VSPR+ +FTPLL ST VGT+E +S+ EP+ I R PG ++ + +D V ++V+++ E + +SYD LV+++GA+ +TF I GV Sbjct: 59 LTFYTTLAGTLYVSYELYKESNPPKQVPQSTAFANGLKKKELVILGTGWGAISLLKKLDTSLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIVEPVRSI---ARRTPGEVHYIEAEALDVDPKAKKVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGV 219
BLAST of FC929928 vs. ExPASy Swiss-Prot
Match: NDH1_SCHPO (Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC3A11.07 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 195 PTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSY--FFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEMQLF 617 P K +VVLG+GW +++ IDTSL++V+ VSPRN+ +FT LL ST G++ RS+ +PI + R Y F+ + C +D D V+H + T + LE +I YD LV + GAE TF I G+ E F Sbjct: 85 PLPDPSKKTLVVLGAGWGATSILRTIDTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSIVQPIR----YMLRHKSCYVKFYEAECTDVDADKKVIHIKKTTTDGVDLEQ---EIKYDYLVCSHGAETQTFNIPGIAEYGCF 220
BLAST of FC929928 vs. ExPASy Swiss-Prot
Match: NDI1_YEAST (Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae GN=NDI1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 59/182 (32.42%), Postives = 97/182 (53.30%), Query Frame = 3 Query: 117 ILTCLSHFTTDASPSTVQVTQYSGLGPT----------KANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKF---------KISYDKLVIALGAEASTFGIHGVKE 605 +LT + AS + V + SG GPT + ++KP V++LGSGW +K IDT Y+V +SPR++ +FTPLL S VGT++ +S+ EPI A+ ++ ++ + I+ D + V ++++ + +P +I YD L+ A+GAE +TFGI GV + Sbjct: 12 LLTSTNTLVRFASTRSTGV-ENSGAGPTSFKTMKVIDPQHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNF--ALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTD 190
BLAST of FC929928 vs. ExPASy Swiss-Prot
Match: NDH2_SCHPO (Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC947.15c PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.149e-18 Identity = 54/135 (40.00%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 213 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEMQLF 617 K +VVLGSGW +K +D SLY++ VSPR+H +FTP+L S VGTL S+ EPI + + S + C IDT V T+ E + I YD LV A+GA TFGI GV++ F Sbjct: 90 KKNIVVLGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSITEPIVALFK--GKIDPSNIHQAECTAIDTSAKKV---TIRGTTEANEGKEAVIPYDTLVFAIGAGNQTFGIQGVRDHGCF 219 The following BLAST results are available for this feature:
BLAST of FC929928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929928 ID=FC929928; Name=FC929928; organism=Citrus clementina; type=EST; length=695bpback to top |