FC929955

Overview
NameFC929955
Unique NameFC929955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:1..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.252e-42
Identity = 75/137 (54.74%), Postives = 101/137 (73.72%), Query Frame = 1
Query:  289 GKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G    G+EV++ YTP + D  +GHF+L+IK Y  G +S H     VG+++ ++GPKG F Y P  V++FGM AGG+GI PM+Q+  AIL+NP DKTK+HL+YANVT  DILLKEELD FAA++PD+  I+YVLN+ P
Sbjct:   93 GATIDGKEVVRSYTPISTDDQLGHFDLLIKTYENGNISRHVAGKNVGEHIEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILKNPEDKTKIHLVYANVTESDILLKEELDNFAARHPDRLKIHYVLNEAP 229          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.976e-40
Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 1
Query:  289 GKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G     +EV++ YTP + D ++G+F+L+IK Y  G +S H    ++G+ + ++GPKG F Y PG V +FGM AGG+GITPM+Q+  AIL NP DKTKV L+YANVT +DILLKEEL+  A ++PD+F IYYVLN PP
Sbjct:   83 GATINDKEVVRSYTPISTDDELGYFDLLIKAYENGNISRHVESKKIGETIDIRGPKGFFTYTPGMVESFGMIAGGTGITPMYQILTAILRNPEDKTKVSLVYANVTEDDILLKEELNKMAREHPDRFKIYYVLNTPP 219          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_PICST (NADH-cytochrome b5 reductase 1 OS=Pichia stipitis GN=CBR1 PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.298e-39
Identity = 71/132 (53.79%), Postives = 99/132 (75.00%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+EV++ YTP + D ++G+F+L+IK Y  G +S H    +VG+Y+ ++GPKG F Y P  V++FGM AGG+GI PM+Q+  AIL NP DKTK+ LIYANVT  DILLK ELD +A ++PD F+++YVLN+ P
Sbjct:   88 GKEVVRSYTPISTDDELGYFDLLIKTYENGNISKHVDSKKVGEYVEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILRNPADKTKISLIYANVTESDILLKSELDKWAEEHPDNFSVHYVLNEAP 219          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.331e-39
Identity = 74/132 (56.06%), Postives = 101/132 (76.52%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+EV +PYTP + D + G+F+L+IK+Y +G MS +   M +GD + VKGPKG+F YQP   ++ GM AGG+GITPM QV +AIL+NP+DKT++ L++ N+T EDILLK+ELD  A K+P QF +YYVLN PP
Sbjct:   99 GKEVYRPYTPISSDEERGYFDLLIKVYEKGAMSGYVDNMFIGDSIEVKGPKGKFNYQPNMRKSIGMLAGGTGITPMLQVIKAILKNPSDKTEISLVFGNITEEDILLKKELDELAEKHP-QFKVYYVLNNPP 229          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_PICGU (NADH-cytochrome b5 reductase 1 OS=Pichia guilliermondii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39
Identity = 74/137 (54.01%), Postives = 98/137 (71.53%), Query Frame = 1
Query:  289 GKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G    G+EV++ YTP + D ++G+F+L+IK Y QG +S H     VGD++ V+GPKG F Y P  V   GM AGG+GI PM+QV  AIL NP+DKTK+ L+YANVT EDILL+ ELD FA ++PD+F ++YVLN  P
Sbjct:   83 GATINGKEVVRSYTPISRDDELGYFDLLIKTYEQGNISRHVDSKSVGDHIEVRGPKGFFTYTPNMVEHLGMIAGGTGIAPMYQVLTAILTNPDDKTKISLVYANVTEEDILLRAELDLFAKEHPDRFKVHYVLNNAP 219          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.133e-38
Identity = 71/133 (53.38%), Postives = 99/133 (74.44%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+++++ YTPT+LDSD VGHFEL+IK Y +G +S HF ++ +GD + V+GPKG + YQP      GM AGG+GI PM+Q+ ++I  N +DKTKV L+Y N T EDILLK+ELD F  + PDQF +YY+L++ P
Sbjct:   84 GKDILRSYTPTSLDSDAVGHFELLIKSYEKGNISKHFAQLNIGDKIKVRGPKGFYHYQPNMNEEIGMIAGGTGIAPMYQIMKSIFANDSDKTKVSLVYGNQTEEDILLKKELDAFVERKPDQFKVYYLLDKAP 216          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_MORAP (NADH-cytochrome b5 reductase 1 OS=Mortierella alpina GN=CBR1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 73/132 (55.30%), Postives = 96/132 (72.73%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+++ + YTPT+   DVGHF L IK YPQG +S  F E+ +GD +  +GPKG+F Y P   RA GM AGG+G+TPM Q+ RAI++NP DKT+V+ I+ANVT EDI+LK ELD  + K+P QF +YYVLN  P
Sbjct:  103 GKDISRSYTPTSSSDDVGHFVLCIKSYPQGNISKMFSELSIGDSINARGPKGQFSYTPNMCRAIGMIAGGTGLTPMLQIIRAIVKNPEDKTQVNFIFANVTEEDIILKAELDLLSQKHP-QFKVYYVLNNAP 233          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_LODEL (NADH-cytochrome b5 reductase 1 OS=Lodderomyces elongisporus GN=CBR1 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.080e-37
Identity = 67/132 (50.76%), Postives = 97/132 (73.48%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+EV++ YTP +L    GHF+L+IK Y  G +S H  E +VGD++ ++GPKG F Y P   ++ G+ AGG+GI PM+Q+  AI+ NP DKTKVHL+YANVT  DILL++EL+ +A ++PD+  I++VLN+ P
Sbjct:  104 GKEVVRSYTPISLGDQQGHFDLLIKTYENGNISRHVAEKQVGDFVEIRGPKGFFTYTPNMKKSLGLIAGGTGIAPMYQIITAIMNNPEDKTKVHLLYANVTENDILLRDELEQYAKEHPDRLKIHHVLNEAP 235          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_USTMA (NADH-cytochrome b5 reductase 1 OS=Ustilago maydis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.996e-36
Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+ V++ YTPT+ D D G F+LV+K Y QG +S +   M++GD L+VKGPKG+ RY PG  R  GM AGG+G+TP  Q+ RA L+NP DKT++  IYANV   DILLK+ELD  A K+ DQF I Y LN+ P
Sbjct:  128 GKTVVRSYTPTSSDDDHGFFDLVVKSYEQGNVSKYIGSMKIGDLLSVKGPKGQMRYAPGLSRHIGMIAGGTGLTPCLQIIRAALKNPADKTQIDFIYANVKETDILLKDELDELALKHKDQFRISYFLNEAP 259          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_LACBS (NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor (strain S238N-H82) GN=MCR1.1 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.448e-36
Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            D  G+ +++ YTP +  +  G FEL+IK Y +G +S H   +++GD L VKGPKG F+Y PG     GM AGG+G+ PM Q+ RAIL+NP D+T + LIYANV  EDILL+ ELD  A  Y  +F ++YVLN PP
Sbjct:  108 DINGKNIVRSYTPISRQNARGRFELIIKTYEKGNISRHVASLKIGDTLRVKGPKGNFKYTPGLTAHLGMIAGGTGLAPMIQIVRAILQNPPDRTNITLIYANVNEEDILLRAELDALAMGYESRFNLFYVLNNPP 242          
The following BLAST results are available for this feature:
BLAST of FC929955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
NCB5R_CANAL9.252e-4254.74NADH-cytochrome b5 reductase 1 OS=Candida albicans... [more]
NCB5R_DEBHA2.976e-4054.01NADH-cytochrome b5 reductase 1 OS=Debaryomyces han... [more]
NCB5R_PICST4.298e-3953.79NADH-cytochrome b5 reductase 1 OS=Pichia stipitis ... [more]
NCB5R_DICDI7.331e-3956.06NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]
NCB5R_PICGU9.575e-3954.01NADH-cytochrome b5 reductase 1 OS=Pichia guillierm... [more]
NCB5R_KLULA2.133e-3853.38NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
NCB5R_MORAP1.059e-3755.30NADH-cytochrome b5 reductase 1 OS=Mortierella alpi... [more]
NCB5R_LODEL3.080e-3750.76NADH-cytochrome b5 reductase 1 OS=Lodderomyces elo... [more]
NCB5R_USTMA1.996e-3654.55NADH-cytochrome b5 reductase 1 OS=Ustilago maydis ... [more]
NCB5R_LACBS4.448e-3650.37NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor... [more]

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Properties
Property NameValue
Genbank descriptionC34002C03EF PostHarvC1 Citrus clementina cDNA clone C34002C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929955 ID=FC929955; Name=FC929955; organism=Citrus clementina; type=EST; length=701bp
GAGAGCACCAGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTC
CCACCCATTTACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATT
TATTCTCTATATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTAT
TGGTGAGCTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAG
ATGTTCAGCTTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTT
GGTGCTGCTTACTTGTATTCCTCTAAGAAGCCCAAAGGGGCAAGGATAGT
CAGGGTGAAGAGGTTATTAAACCATATACCCCAACCACATTGGATTCTGA
TGTTGGTCATTTTGAATTGGTTATTAAGATGTACCCCCAAGGAAGGATGT
CACACCATTTCCGTGAGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGA
CCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTCAGAGCATTTGGGAT
GACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCAAGTTACTAGAGCCA
TATTAGAGAACCCAAATGACAAGACAAAGGTGCACCTCATTTATGCCAAT
GTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGATGGATTTGCGGC
GAAGTACCCTGATCAATTCACAATCTACTATGTGTTGAATCAGCCTCCTG
A
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