FC929967

Overview
NameFC929967
Unique NameFC929967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:214..944. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMP3_SOLLC (Inositol monophosphatase 3 OS=Solanum lycopersicum GN=IMP3 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 7.722e-95
Identity = 170/211 (80.57%), Postives = 187/211 (88.63%), Query Frame = 3
Query:   99 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHAXGLICF 731
            MAQN S+ +FLD AV+AAK+AGEIIR GFY+TK+VEHKG VDLVTETDKACED IFNHLKQ+FP+HKFIGEETTAACG  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P VGVVYNPI+DELFTG+ G+GAF NGKPIKVSSQ+ELVK+LLATEAGT RDK  +DA+T RINSLLFKVRSLRM GSCALNLCG+    L  F
Sbjct:    1 MAQNGSVEQFLDVAVEAAKKAGEIIREGFYKTKHVEHKGMVDLVTETDKACEDFIFNHLKQRFPSHKFIGEETTAACGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPTVGVVYNPIIDELFTGIDGKGAFLNGKPIKVSSQSELVKALLATEAGTNRDKLVVDATTGRINSLLFKVRSLRMCGSCALNLCGVACGRLDLF 211          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: VTC4_ARATH (Inositol-phosphate phosphatase OS=Arabidopsis thaliana GN=VTC4 PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.537e-94
Identity = 165/203 (81.28%), Postives = 186/203 (91.63%), Query Frame = 3
Query:   99 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGM 707
            MA NDSL +FL  A+DAAK+AG+IIR GFY+TK+VEHKGQVDLVTETDK CE+L+FNHLKQ FP HKFIGEETTAA G TELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P+VGVVYNPIM+ELFTGV+G+GAF NGK IKVS+Q+EL+ +LL TEAGTKRDK TLD +TNRINSLL KVRSLRMSGSCAL+LCG+
Sbjct:    1 MADNDSLDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPIMEELFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTNRINSLLTKVRSLRMSGSCALDLCGV 203          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMPP_MESCR (Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.044e-91
Identity = 165/203 (81.28%), Postives = 180/203 (88.67%), Query Frame = 3
Query:   99 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGM 707
            MA N  L+ FL TAVDAAKRAGE+IR GFY  KNVEHKGQVDLVTETDK+CED+IFN LKQQ+P HKFIGEETTAA GATELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P VGVVYNPIM+ELFTGVR QGAF NG PI VSS+ ELV  LL TE GTKRDK T+DA+TNRIN LLFKVRS+RM+GSCAL+LCG+
Sbjct:    1 MAANVPLSDFLATAVDAAKRAGEVIRKGFYVKKNVEHKGQVDLVTETDKSCEDIIFNCLKQQYPNHKFIGEETTAAYGATELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPTVGVVYNPIMNELFTGVRRQGAFLNGVPIHVSSKDELVNCLLVTEVGTKRDKSTVDATTNRINGLLFKVRSIRMAGSCALDLCGI 203          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMP1_SOLLC (Inositol monophosphatase 1 OS=Solanum lycopersicum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.080e-88
Identity = 158/201 (78.61%), Postives = 179/201 (89.05%), Query Frame = 3
Query:   99 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLC 701
            MA+N SL +FL  AVDAAKRAGEIIR GF++TK+V HKGQVDLVTETDKACEDLIFNHLKQ FP+HKFIGEET+AA G  +LTDEPTWIVDP+DGTTNFVHGFP VC+SIGLTIGKIP VGVVY+PI+DELFTG+ G+GA+ NGKPIKVSSQ+ELVKSLL TE GT RD  T++ +T RIN+LLFKVRSLRM GSCAL+LC
Sbjct:    1 MARNGSLEEFLGVAVDAAKRAGEIIRKGFHETKHVVHKGQVDLVTETDKACEDLIFNHLKQHFPSHKFIGEETSAATGDFDLTDEPTWIVDPVDGTTNFVHGFPSVCVSIGLTIGKIPTVGVVYDPIIDELFTGINGKGAYLNGKPIKVSSQSELVKSLLGTEVGTTRDNLTVETTTRRINNLLFKVRSLRMCGSCALDLC 201          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMP2_SOLLC (Inositol monophosphatase 2 OS=Solanum lycopersicum GN=IMP2 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.595e-84
Identity = 151/206 (73.30%), Postives = 179/206 (86.89%), Query Frame = 3
Query:  117 LAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAAC-GATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHAXGLICF 731
            + +F+D A++AAK+AGEIIR+GFY++K++EHKG VDLVTETDKACE LIFNHLKQ FP+HKFIGEETTAA  G  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P+VGVVYNPI+DELFT + G+GAF NGK I+VSS+++LVK+L+ATE GT RDK  +DA+T RIN ++FKVRSLRMSGSCALNLCG+    L  F
Sbjct:    1 MEEFVDVAIEAAKKAGEIIRHGFYKSKHIEHKGVVDLVTETDKACEVLIFNHLKQCFPSHKFIGEETTAAASGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPVVGVVYNPIIDELFTAIYGRGAFLNGKSIRVSSESQLVKALVATEVGTNRDKAIVDATTGRINRVIFKVRSLRMSGSCALNLCGVACGRLDLF 206          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMPA1_BOVIN (Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.958e-43
Identity = 87/199 (43.72%), Postives = 127/199 (63.82%), Query Frame = 3
Query:  111 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLC 701
            D   + +D AV  A +AGE++R       N+  K    DLVT TD+  E ++   +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    G+VY+ + D+++TG +G+GAF NG+ ++VS Q ++ KSLL TE G+ R   T+    + I  LL   +  +R  G+ ALN+C
Sbjct:    3 DPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLCLPIHGIRGVGTAALNMC 201          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMPA1_PIG (Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.584e-42
Identity = 86/199 (43.22%), Postives = 128/199 (64.32%), Query Frame = 3
Query:  111 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLC 701
            D   + +D AV  A++AGEI+R       N+  K    DLVT TD+  E ++ + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    GVVY+ + D+++TG +G+GAF +G+ ++VS Q ++  SLL TE G+ R   T+    + +  LL   +  +R  G+ ALN+C
Sbjct:    3 DPWQECMDYAVTLARQAGEIVREALKNEMNIMIKSSPADLVTATDEKVEKMLISSIKEKYPSHSFIGEESVAAGEKSVLTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKGMEFGVVYSCMEDKMYTGRKGRGAFCDGQKLQVSPQKDVTNSLLVTELGSSRTPETVRIILSNMERLLCIPIHGIRGVGTAALNMC 201          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMPA2_RAT (Inositol monophosphatase 2 OS=Rattus norvegicus GN=Impa2 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.764e-41
Identity = 90/192 (46.88%), Postives = 122/192 (63.54%), Query Frame = 3
Query:  132 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLC 701
            + AV  A RAG+IIR    + K+V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG RGQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKHVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALC 214          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMPA2_MOUSE (Inositol monophosphatase 2 OS=Mus musculus GN=Impa2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.916e-41
Identity = 90/192 (46.88%), Postives = 121/192 (63.02%), Query Frame = 3
Query:  132 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLC 701
            + AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG RGQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALC 214          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMPA2_HUMAN (Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA2 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40
Identity = 89/190 (46.84%), Postives = 119/190 (62.63%), Query Frame = 3
Query:  138 AVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLC 701
            AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE  A+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+Y+   + L+TG RG+GAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC
Sbjct:   23 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALC 212          
The following BLAST results are available for this feature:
BLAST of FC929967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
IMP3_SOLLC7.722e-9580.57Inositol monophosphatase 3 OS=Solanum lycopersicum... [more]
VTC4_ARATH6.537e-9481.28Inositol-phosphate phosphatase OS=Arabidopsis thal... [more]
IMPP_MESCR1.044e-9181.28Inositol monophosphatase OS=Mesembryanthemum cryst... [more]
IMP1_SOLLC1.080e-8878.61Inositol monophosphatase 1 OS=Solanum lycopersicum... [more]
IMP2_SOLLC3.595e-8473.30Inositol monophosphatase 2 OS=Solanum lycopersicum... [more]
IMPA1_BOVIN8.958e-4343.72Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 ... [more]
IMPA1_PIG7.584e-4243.22Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 ... [more]
IMPA2_RAT3.764e-4146.88Inositol monophosphatase 2 OS=Rattus norvegicus GN... [more]
IMPA2_MOUSE4.916e-4146.88Inositol monophosphatase 2 OS=Mus musculus GN=Impa... [more]
IMPA2_HUMAN1.868e-4046.84Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA... [more]

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Properties
Property NameValue
Genbank descriptionC34002D03EF PostHarvC1 Citrus clementina cDNA clone C34002D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929967 ID=FC929967; Name=FC929967; organism=Citrus clementina; type=EST; length=731bp
GGTCATTACCACCATCATCACTCATCAGCTCGCTGTCCCTTCTCTTCTCG
TTCTTCTCTTTAACTTTTTAATCCCGTATAATAAAAAATTCTACCCATAT
GGCACAAAATGATTCGCTTGCAAAGTTCTTGGACACTGCAGTTGATGCAG
CTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAAT
GTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCATG
TGAGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCGCGCATAAGT
TCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACTGAT
GAACCCACTTGGATTGTTGATCCTCTTGATGGAACAACTAACTTTGTGCA
TGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATTC
CTATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGGA
GTCCGTGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCATC
TCAAACTGAACTAGTAAAGTCTCTCCTCGCAACAGAGGCTGGAACAAAAC
GTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGCTA
TTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTTTG
TGGAATGCATGCGNAAGGCTTGATCTGTTTT
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