FC929984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_NEMVE (Proteasome assembly chaperone 2 OS=Nematostella vectensis GN=psmg2 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 66 EEGKHLSESCSNLILPALSIGNVGQLAVDLLVSSTGAET--VGYLDDQFVLPCVGNDAYRP--SPRGGLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS-SGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 542 E L S LILPA+SIGNVGQLA DL +SS + +GYL D +LP VGNDA+ +G L L + Y+S+ L ++QQR+P+ KG Y + L + K VV+LS++ R+D G + Y++++ ++L W +L++ Sbjct: 7 ENVNDLDFSGFTLILPAVSIGNVGQLATDLTISSLSSSRHLIGYLHDASILPVVGNDAFARLGHEKGELNLSAEVYQSTEKRLVIVQQRAPISKGHYANYCQKLLAWIKRCSFKQVVLLSSI--SATDRVDAQLQGSPLRYMTTSVSQQLSSSFDKLSWVQLEK 168
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_DICDI (Proteasome assembly chaperone 2 OS=Dictyostelium discoideum GN=psmG2 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 44/135 (32.59%), Postives = 84/135 (62.22%), Query Frame = 3 Query: 102 LILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYR--PSPRGGLALPLQAYESS-SSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS-SGPQIYYLSSTSVD 494 LI P+L++GN+GQL +D+L+ S + +G++ D+ + P +GND + + G ++ ++ Y+SS +TL+QQRSP+V G + +++NL + A K ++ LS+ + + R+D +G Q+ ++ S +VD Sbjct: 22 LIWPSLTLGNIGQLTIDVLICSFEFKRIGFIVDENITPIIGNDCFTTLDNNNGIMSTSIEVYQSSLFPSITLVQQRSPIVDGRIPNFSENLFKWINAEEIKEILFLSSSNANK--RVDSQLTGSQVRFIKSDNVD 154
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_DANRE (Proteasome assembly chaperone 2 OS=Danio rerio GN=psmg2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14 Identity = 46/149 (30.87%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 102 LILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRGG--LALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 542 LILPA+S+GNVGQLAVDLL+S+ VGY ++P GN+ Y S L+ + Y L ++Q R+P+++ + + K + + +SG V+LS+ + + P Y LS + E+LGW+ +++ Sbjct: 17 LILPAVSVGNVGQLAVDLLISTLNMPRVGYFHTDCLIPMAGNNPYASSTEDAAQLSTSAEVYSHRDLKLAVLQIRAPIIQTKVKSFRKLMISWMKSSGFLRTVLLSSAHAYQRDDQQLHGTPLRYMLSPSLEKEERQRFEELGWREMEK 165
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_BOVIN (Proteasome assembly chaperone 2 OS=Bos taurus GN=PSMG2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.467e-14 Identity = 44/149 (29.53%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 102 LILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRGGLALPLQA--YESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 542 L++PA+S+GNVGQLA+DL++S+ +GY ++P VGN+ Y + L + A Y S L +Q RS +K + + L + SG VVVLS+ + + S P Y L+ + + + L W+ +++ Sbjct: 17 LLMPAVSVGNVGQLAIDLIISTLNMHKIGYFYTDCLVPMVGNNPYATAEENSAELSINAEVYALPSKKLVALQLRSIFIKYKSKSFCEKLLSWVKCSGCAKVVVLSSSHSYHRNDLQLRSTPFRYLLTPSMQKSVQNKIQSLNWEEMEK 165
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_HUMAN (Proteasome assembly chaperone 2 OS=Homo sapiens GN=PSMG2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13 Identity = 43/149 (28.86%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 102 LILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRGGLALPLQA--YESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 542 L++PA+S+GNVGQLA+DL++S+ +GY ++P VGN+ Y + L + A Y S L +Q RS +K + + L + +SG V+VLS+ + + + S P Y L+ + + + L W+ +++ Sbjct: 17 LLMPAVSVGNVGQLAMDLIISTLNMSKIGYFYTDCLVPMVGNNPYATTEGNSTELSINAEVYSLPSRKLVALQLRSIFIKYKSKPFCEKLLSWVKSSGCARVIVLSSSHSYQRNDLQLRSTPFRYLLTPSMQKSVQNKIKSLNWEEMEK 165
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_XENLA (Proteasome assembly chaperone 2 OS=Xenopus laevis GN=psmg2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12 Identity = 44/153 (28.76%), Postives = 71/153 (46.41%), Query Frame = 3 Query: 90 SCSNLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRGG--LALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 542 S S L+LPA+S+GNVGQLA+DL++S+ VGY ++P VGN+ Y + L + Y S L ++Q RS V+K + + L + V+ LS+ + P Y ++ D +L WK +++ Sbjct: 13 SVSTLLLPAISVGNVGQLAIDLIISTLNIPKVGYFYTDCLVPMVGNNPYETNEENAKELCTNAEVYALPSQKLAVLQLRSLVIKKKSKSFRQALVSWIKRCAFARVIFLSSCHAYHRDDKQLFGTPFRYLVTPALQKSVADVLSELEWKEMEK 165
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_MOUSE (Proteasome assembly chaperone 2 OS=Mus musculus GN=Psmg2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12 Identity = 41/149 (27.52%), Postives = 73/149 (48.99%), Query Frame = 3 Query: 102 LILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRGG--LALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 542 L++PA+S+GNVGQLA+DL++S+ +GY ++P VGN+ Y L++ + Y S L ++Q RS +K + + L + +SG ++VLS+ + S P Y L+ + + L W +++ Sbjct: 17 LLMPAVSVGNVGQLAIDLIISTLNMCKIGYFYTDCLVPMVGNNPYATEEENSNELSINTEVYSLPSKKLVVLQLRSIFIKYKSKSFCEKLLAWVESSGCARIIVLSSSHSYHRNDAQLRSTPFRYLLTPCLQKSVQNKIKSLNWLEMEK 165
BLAST of FC929984 vs. ExPASy Swiss-Prot
Match: PSMG2_XENTR (Proteasome assembly chaperone 2 OS=Xenopus tropicalis GN=psmg2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 41/149 (27.52%), Postives = 70/149 (46.98%), Query Frame = 3 Query: 102 LILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRGG--LALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 542 L+LPA+S+GNVGQLA+DL++S+ VGY ++P VG++ Y L + Y S L ++Q RS V+K + + L + V++LS+ + P Y ++ D ++L WK +++ Sbjct: 17 LLLPAISVGNVGQLAIDLIISTLKIPKVGYFYTDCLVPMVGSNPYETDEENAKELCTNAEVYALPSQKLAVLQLRSLVIKKKSKSFRQALVSWIKRCAFARVILLSSCHAYHRDDTQLFGTPFRYLVTPALQKSVADVLKELEWKEMEK 165 The following BLAST results are available for this feature:
BLAST of FC929984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929984 ID=FC929984; Name=FC929984; organism=Citrus clementina; type=EST; length=720bpback to top |