FC929989

Overview
NameFC929989
Unique NameFC929989
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15282 contig Ccv1_Contig15282:783..1486. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.190e-91
Identity = 152/237 (64.14%), Postives = 192/237 (81.01%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS---AVCSACEMTVVWVQNQLKQKQTKEKVLSYINEFCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 702
            VFGGVDPKH++GKHTYVPVT+KGYWQF++GD+LI  + TG C+GGC+AI DSGTSLLAGPTPV+T INHAIG +GVVS +CK VV+QYG  I DLL+S   P+K+C QI LC F+G   VS GI++VV++    + DS    +CS CEMTVVW+QNQL+Q QTKE++++YINE CD +P+PMG+S +DCG++ +MP VSFTIG KIF+L+PE+YILK GEG    CISGF AFD+PP
Sbjct:  244 VFGGVDPKHYRGKHTYVPVTQKGYWQFDMGDVLIDGEPTGFCDGGCSAIADSGTSLLAGPTPVITMINHAIGAKGVVSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPP 480          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 2.770e-86
Identity = 143/234 (61.11%), Postives = 187/234 (79.91%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINEFCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 702
            VFGG+DPKH+KG HTYVPV++KGYWQFN+GD+LI   STG C  GCAAIVDSGTSLLAGPT +V ++NHAIG EG++S ECK VVS+YG++I +LL++   P+KVC Q+GLC F+G   VS GI++VV+KEN+  G  A+CS CEM VVW++NQL++ +TKE +L+Y N+ C+ LP+P GES + C +I  MPN++FTI +K F L+PEQYI+K  +G   VCISGFMAFD+PP
Sbjct:  232 VFGGMDPKHYKGDHTYVPVSRKGYWQFNMGDLLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENL--GSDAMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPP 463          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.345e-85
Identity = 142/237 (59.92%), Postives = 182/237 (76.79%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD---SAVCSACEMTVVWVQNQLKQKQTKEKVLSYINEFCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 702
            +FGG+DPKH+ G+HTYVPVT+KGYWQF++GD+L+G +STG C GGCAAI DSGTSLLAGPT ++TEIN  IG  GVVS ECK +VSQYG  I DLL++   P+K+C Q+GLC F+G   VS GI++VV+ E V +       +CSACEM VVW+QNQL Q +T++ +L Y+N+ C+ LP+PMGES +DCG + +MP++ FTIG K F L PE+YILK GEG A  CISGF A D+PP
Sbjct:  239 IFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPP 475          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 1.520e-84
Identity = 146/240 (60.83%), Postives = 181/240 (75.42%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS------AVCSACEMTVVWVQNQLKQKQTKEKVLSYINEFCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 702
            VFGG+DP H+KG HTYVPV++KGYWQF +GD+LIG ++TG C  GC+AI DSGTSLLAGPT ++TEIN  IG  GVVS ECK VVSQYG  I DLL++   P K+C Q+GLC F+G   VS GIK+VV+ E   AG+S       +C+ACEM VVW+QNQL Q +T++ +L+YIN+ CD LP+PMGES +DCG + +MP +SFTIG K F L PE+YILK GEG A  CISGF A D+PP
Sbjct:  240 VFGGMDPSHYKGNHTYVPVSQKGYWQFEMGDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDE---AGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPP 476          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.055e-77
Identity = 131/235 (55.74%), Postives = 178/235 (75.74%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEK-ENVSAGDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINEFCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 702
            VFGGVDP HFKG+HTYVPVT+KGYWQF +GD+LIG+++TG C  GCAAI DSGTSLLAG T +VT+IN AIG  GV+S +CK +V QYG  + ++L+S   PEK+C Q+ LC+F+G+   S  I++VV+K +  S+G    C  C   VVW+QNQ++Q +T+E +++Y+++ C+ LP+PMGES +DC  + +MPN++FT+G K FNLSPEQY+LK GEG    CISGF A D+ P
Sbjct:  206 VFGGVDPNHFKGEHTYVPVTQKGYWQFEMGDVLIGDKTTGFCASGCAAIADSGTSLLAGTTTIVTQINQAIGAAGVMSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSGLPMRCVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAP 440          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26
Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEG 225
            VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG  G
Sbjct:  140 VFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGANG 214          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 216
            VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:  126 VFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 197          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 216
            VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:  126 VFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 197          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 216
            VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:   84 VFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 155          
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 1
Query:    1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE----CKLV 252
            +FGG D   + G  TY+ V +K YWQF +  + +G+  T  C  GC AI D+GTSL+AGP   VT IN AIGG  +++ E    C L+
Sbjct:  224 IFGGSDSNKYTGDFTYLSVDRKAYWQFKMDSVKVGD--TEFCNNGCEAIADTGTSLIAGPVSEVTAINKAIGGTPIMNGEYMVDCSLI 309          
The following BLAST results are available for this feature:
BLAST of FC929989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
ASPR_CUCPE2.190e-9164.14Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPRX_ORYSJ2.770e-8661.11Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR_HORVU2.345e-8559.92Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ1.520e-8460.83Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA1.055e-7755.74Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
CARDF_CYNCA3.221e-2668.00Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDH_CYNCA1.599e-2569.44Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDG_CYNCA1.599e-2569.44Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDE_CYNCA1.599e-2569.44Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]
ASPP_AEDAE5.699e-1544.32Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34002F01EF PostHarvC1 Citrus clementina cDNA clone C34002F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929989 ID=FC929989; Name=FC929989; organism=Citrus clementina; type=EST; length=704bp
GTTTTTGGTGGTGTTGATCCAAAGCACTTTAAAGGGAAGCATACCTATGT
TCCTGTTACTAAAAAAGGCTACTGGCAGTTCAATTTGGGAGATATATTAA
TTGGGAATCAGTCCACAGGTGTTTGTGAGGGTGGTTGTGCTGCCATTGTG
GACTCAGGAACATCCTTACTAGCCGGTCCAACACCTGTTGTGACTGAAAT
CAATCATGCCATTGGTGGTGAAGGAGTTGTTAGTGCGGAGTGTAAGCTAG
TTGTTTCCCAGTATGGGGATTTAATATGGGATCTCTTAGTATCAGGGCTA
CTACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTGCTTTCAATGGCGC
TGAATATGTGAGTACTGGGATCAAGACCGTGGTTGAGAAGGAAAACGTAT
CAGCCGGGGATAGTGCTGTGTGCAGTGCTTGTGAAATGACCGTGGTTTGG
GTCCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGAAAGTACTCAGTTA
TATAAATGAGTTCTGCGACAGCCTGCCAAATCCGATGGGAGAATCAATTA
TTGACTGTGGTCGCATTCCAACCATGCCAAATGTTTCATTCACCATCGGA
GACAAAATTTTCAACCTCTCTCCAGAGCAGTATATTCTGAAAACCGGAGA
AGGGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCTTTCGACCTGCCTC
CTCC
back to top