FC929999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_ARATH (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 8.937e-54 Identity = 106/164 (64.63%), Postives = 131/164 (79.88%), Query Frame = 2 Query: 182 LMALNLQSPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSA-----QGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR 658 +M LN SPAE KA+SFL+T+R N +PKLSGGF L+R++ FG+ V+CS Q PPPAWPGRAV E R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQV+RFKP +VAVRNESL++E+KEALA+++ PG + Sbjct: 1 MMTLNSLSPAESKAISFLDTSRFNP-IPKLSGGFSLRRRNQGRG-FGKGVKCSVKVQQQQQPPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQ 162 HSP 2 Score: 29.261 bits (64), Expect = 8.937e-54 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 631 KPEILAGEQGVIEAARH 681 K EI+ GEQGVIE ARH Sbjct: 154 KLEIIPGEQGVIEVARH 170
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_MENPI (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 8.106e-49 Identity = 103/166 (62.05%), Postives = 125/166 (75.30%), Query Frame = 2 Query: 203 SPAEIKALSFLETTRSNHRLP--KLSGGFPLKRKDNATATFGRIVQCSAQG--PPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR---ESLRLPD 679 +P EIK LSFL++++SN+ L K GGF KRKD+ T + V CSAQ PPPAWPGRA E R TW+GPKPISV+GSTGSIGTQTLDIVAE+ DKFR+VALAAGSN+TLLADQVK FKP++V+V++ESL+ E+KEALA E+ P PG + E R PD Sbjct: 2 APTEIKTLSFLDSSKSNYNLNPLKFQGGFAFKRKDSG-CTAAKRVHCSAQSQSPPPAWPGRAFPEPGRMTWEGPKPISVIGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKAFKPKLVSVKDESLISELKEALAGFEDMPEIIPGEQGMIEVARHPD 166
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_ORYSJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 7.101e-45 Identity = 97/169 (57.40%), Postives = 120/169 (71.01%), Query Frame = 2 Query: 185 MALNLQS-PAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR---ESLRLPD 679 MAL + S P ++ A+SFL++ R +L P + +D + R Q PPPAWPGRAV E R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQVK FKP++VAVRNESL+DE+KEALA+ + P PG + E R PD Sbjct: 1 MALKVVSFPGDLAAVSFLDSNRGG-AFNQLKVDLPFQTRDRRAVSLRRTCCSMQQAPPPAWPGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPD 168
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_MICAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Microcystis aeruginosa (strain NIES-843) GN=dxr PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.528e-22 Identity = 43/75 (57.33%), Postives = 64/75 (85.33%), Query Frame = 2 Query: 413 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 637 K IS+LGSTGSIGTQTLDIV +H DKF+VV LA G+NI LL++Q+++F+PQ+VA+ NES L+++K +++++ +P Sbjct: 2 KKISILGSTGSIGTQTLDIVTDHPDKFQVVGLATGNNIQLLSEQIRQFRPQIVAINNESQLEDLKSLISDLDYTP 76 HSP 2 Score: 29.261 bits (64), Expect = 1.528e-22 Identity = 17/28 (60.71%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 634 PEILAGEQGVIEAARHQMLSRGDSISVV 717 P ILAG++GVIE AR+ GDS SVV Sbjct: 76 PIILAGKEGVIEVARY-----GDSESVV 98
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_CYAA5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.028e-20 Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 413 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR 658 K IS+LGSTGSIGTQTLDIV ++ D+F+VV LA SN+ LLA QV++F+P++VA+ +ES L +K+A+A+++ SP G + Sbjct: 2 KKISLLGSTGSIGTQTLDIVNQYPDQFQVVGLATRSNVELLATQVQQFRPEIVAICDESKLGSLKDAIASMDYSPLILAGEQ 83 HSP 2 Score: 31.187 bits (69), Expect = 1.028e-20 Identity = 18/28 (64.29%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 634 PEILAGEQGVIEAARHQMLSRGDSISVV 717 P ILAGEQGV E ARH GD+ SVV Sbjct: 76 PLILAGEQGVAEVARH-----GDAESVV 98
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_ACAM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.739e-20 Identity = 41/80 (51.25%), Postives = 65/80 (81.25%), Query Frame = 2 Query: 413 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 652 K I++LGSTGSIGTQTLDIVA++ D+FR+V +AAG NI LL+ Q+++F+P++VA+ + + L ++K+A+A+V+ P+ G Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGMAAGRNIELLSQQIRQFRPEIVAIADPNQLSDLKDAIADVDPQPQLLAG 81 HSP 2 Score: 27.335 bits (59), Expect = 1.739e-20 Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 631 KPEILAGEQGVIEAARHQMLSRGDSISVV 717 +P++LAGE GV+E A + GD+ SVV Sbjct: 75 QPQLLAGEAGVVEVAAY-----GDAESVV 98
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_CYAP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7424) GN=dxr PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.409e-19 Identity = 44/75 (58.67%), Postives = 63/75 (84.00%), Query Frame = 2 Query: 413 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 637 K ISVLGSTGSIGTQTLDIVA++ D+F+VV LAAG+N+ LL+ QV +F+P++VA+ N L+ +KE+L++++ SP Sbjct: 2 KKISVLGSTGSIGTQTLDIVAQYPDQFQVVGLAAGNNVELLSAQVHQFRPEIVAICNLDHLEVLKESLSSLDYSP 76 HSP 2 Score: 25.7942 bits (55), Expect = 2.409e-19 Identity = 14/28 (50.00%), Postives = 18/28 (64.29%), Query Frame = 1 Query: 634 PEILAGEQGVIEAARHQMLSRGDSISVV 717 P IL GEQG++E A + GD+ SVV Sbjct: 76 PIILGGEQGIVEVAGY-----GDAQSVV 98
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_SYNY3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=dxr PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.166e-18 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 413 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE 631 K IS+LGSTGSIGTQTLDIV H D F+VV LAAG N+ LLA QV F+P++VA+R L+++K A+A + + Sbjct: 3 KRISILGSTGSIGTQTLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTD 75 HSP 2 Score: 25.409 bits (54), Expect = 1.166e-18 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 631 KPEILAGEQGVIEAARHQMLSRGDSISVV 717 +P + GE+GV+E AR+ GD+ SVV Sbjct: 77 QPMYVVGEEGVVEVARY-----GDAESVV 100
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_NOSP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.331e-18 Identity = 37/75 (49.33%), Postives = 60/75 (80.00%), Query Frame = 2 Query: 413 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 637 K I+++GSTGSIGTQTLDIV ++ D+FR+V LAAG+N+ +LA Q+++F+P++ A+ +E L +KEA+ +++ P Sbjct: 2 KAITLVGSTGSIGTQTLDIVTQYPDQFRIVGLAAGNNVEMLAAQIRQFRPKIAAICSEDKLPALKEAIIDLDPQP 76 HSP 2 Score: 26.9498 bits (58), Expect = 4.331e-18 Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 631 KPEILAGEQGVIEAARHQMLSRGDSISVV 717 +P +LAGE GVIE AR+ GD+ +VV Sbjct: 75 QPILLAGEAGVIEVARY-----GDAQTVV 98
BLAST of FC929999 vs. ExPASy Swiss-Prot
Match: DXR_PROM9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxr PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 42/72 (58.33%), Postives = 60/72 (83.33%), Query Frame = 2 Query: 413 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE 628 K I+VLGSTGSIGTQTL+I +E DKF+ VAL+AG NITLL +QVK KP+VVA+ +E+L++++K+ + N++ Sbjct: 2 KYITVLGSTGSIGTQTLEIASEQPDKFKAVALSAGRNITLLTEQVKTHKPEVVAIEDENLIEDLKDNINNLD 73 The following BLAST results are available for this feature:
BLAST of FC929999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929999 ID=FC929999; Name=FC929999; organism=Citrus clementina; type=EST; length=720bpback to top |