FC930000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.004e-83 Identity = 140/195 (71.79%), Postives = 168/195 (86.15%), Query Frame = 1 Query: 100 MATDTAVAEHRSSNNG--HGCCAKG-PGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSEFNVKGRWE 675 MAT+T V + +NG GCC G PGYATPL AMSGP EKL+YVT +YTGTG +KPDYLATVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD+S RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I KTGL++PHTAHCLA+G+ILVSCLGD++GNA+GNGFLLLDS+FN+K RWE Sbjct: 1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWE 195 HSP 2 Score: 29.261 bits (64), Expect = 1.004e-83 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 675 KPGHSPAFGYDF 710 KPGHSP +GYDF Sbjct: 196 KPGHSPLYGYDF 207
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.688e-62 Identity = 109/175 (62.29%), Postives = 134/175 (76.57%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S RIY+VD +PRAP +HK VEP ++ K GL+ PHT+HCL G+I++S LGD GN +G GF+LLD E F VKG WE Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMISSLGDPCGNGKG-GFVLLDGETFEVKGNWE 177
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.830e-61 Identity = 108/175 (61.71%), Postives = 134/175 (76.57%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C GPGYATPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+P++ DELHHSGWN+CSSC+GDS+ R L+LPS++S RIY+VD PRAP LHKV+EP +I K L HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WE Sbjct: 5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMISSLGDPQGNGKG-GFVLLDGETFEVKGTWE 178
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 2.390e-61 Identity = 109/175 (62.29%), Postives = 134/175 (76.57%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIY+VD PRAP LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WE Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDGETFEVKGTWE 178
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.122e-61 Identity = 110/175 (62.86%), Postives = 135/175 (77.14%), Query Frame = 1 Query: 157 CAK-GPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C K GPGY +PL+AM GPRE+L+Y+ C+Y TG E PDYLATVD +P S YS+VIHRLP+P + DELHHSGWN+CSSC+GDS+ R L+LPSL+S R+Y+VD PRAP LHKVVEP +I K LSY HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WE Sbjct: 5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMISALGDPRGNGKG-GFVLLDGETFEVKGTWE 178
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 4.078e-61 Identity = 107/175 (61.14%), Postives = 134/175 (76.57%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+VD PRAP LHKV+E ++I K +S HT+HCLASG+++VS LGD GN +G+ F+LLD E F VKG WE Sbjct: 5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVSTLGDLQGNGKGS-FVLLDGETFEVKGTWE 178
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 9.084e-61 Identity = 106/175 (60.57%), Postives = 133/175 (76.00%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C GPGY TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+VD PRAP LHKV+E ++I K +S HT+HCLASG+++V+ LGD GN +G+ F+LLD E F VKG WE Sbjct: 5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGS-FVLLDGETFEVKGTWE 178
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.084e-61 Identity = 107/175 (61.14%), Postives = 133/175 (76.00%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S R+Y+VD +PRAP LHK VEP ++ K GL+ HT+HCL G+I++S LGD GN +G GF+LLD E F VKG WE Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMISALGDPCGNGKG-GFVLLDGETFEVKGNWE 177
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.024e-60 Identity = 108/177 (61.02%), Postives = 135/177 (76.27%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWENQ 681 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIY+VD PRA LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD+E F VKG WE + Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRALKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDAETFEVKGTWERR 180
BLAST of FC930000 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.312e-59 Identity = 106/175 (60.57%), Postives = 131/175 (74.86%), Query Frame = 1 Query: 154 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWE 675 C + GPGY TPLDAM GPRE++LY+ C+Y TG KPDYLATVD +P S YS+VIHRLP+P DELHHSGWN+CSSCYGD+S R L+LP L+S RIY+VD +PRAP +HK VEP ++ K GL+ HT+HCL G+I++S +GD GN +G GF+LLD E F VKG WE Sbjct: 4 CGSCGPGYKTPLDAMKGPREEILYLPCIYRNTGINKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTCSSCYGDASKVRNKLILPCLISSRIYVVDVGTDPRAPRIHKTVEPYEVFWKCGLANLHTSHCLGCGEIMISSIGDPYGNGKG-GFVLLDGETFEVKGNWE 177 The following BLAST results are available for this feature:
BLAST of FC930000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930000 ID=FC930000; Name=FC930000; organism=Citrus clementina; type=EST; length=712bpback to top |