FC930014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184C_PONAB (Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25 Identity = 73/236 (30.93%), Postives = 122/236 (51.69%), Query Frame = 1 Query: 85 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCIKSHHFW 774 A + ++LT S ++ +H + + +P+ QK DS++ L + G +++++ +ECYEA VI F+ L +YL ++ E K + H FP P A + L K Q+ V+RP +I+ + +LLG+Y +WT+ +I+N +S A+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ +V+ +LV G I H W Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL-KYPG---IAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-MGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTW 280
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184C_HUMAN (Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25 Identity = 72/236 (30.51%), Postives = 122/236 (51.69%), Query Frame = 1 Query: 85 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCIKSHHFW 774 A + ++LT S ++ +H + + +P+ QK DS++ L + G +++++ +ECYEA VI F+ L +YL ++ E K + H FP P A + L K Q+ V+RP +I+ + +LLG+Y +WT+ +I+N +S A+Y L++FY V +EL+P +P+ KFLC++ +VF FWQ +V+ +LV G I H W Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL-KYPG---IAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-MGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVRLVVFVSFWQAVVIALLVKVGVISEKHTW 280
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184C_BOVIN (Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.299e-25 Identity = 70/236 (29.66%), Postives = 120/236 (50.85%), Query Frame = 1 Query: 85 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCIKSHHFW 774 A + ++LT S ++ +H + + +P+ QK DS++ L + +++++ +ECYEA VI F+ L +YL ++ E K + H P+ P T + L K Q+ V+RP +I+ + +LL +Y +WT+ +I+N +S A+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ +V+ +LV G I H W Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPSIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLIIEAKDQQKHFP-PLCCCPPWT--MGEVLLFRCKLGVLQYTVVRPFTTIIALVCELLDIYDEGNFSFSNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTW 280
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184B_HUMAN (Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.299e-25 Identity = 72/220 (32.73%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 139 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCIKSHH 768 H + P EQ+ DS++ L+ F + ++++ +V++CYEALVI FL+L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ G Y S ++ TII NISVSLALY+L +FY + L+P+ P+ KF +K ++F FWQG++L IL G I H Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLY--VTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIH 279
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184B_BOVIN (Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.299e-25 Identity = 72/220 (32.73%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 139 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCIKSHH 768 H + P EQ+ DS++ L+ F + ++++ +V++CYEALVI FL+L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ G Y S ++ TII NISVSLALY+L +FY + L+P+ P+ KF +K ++F FWQG++L IL G I H Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLY--VTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIH 279
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184B_MOUSE (Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24 Identity = 70/216 (32.41%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 139 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCI 756 H + +P EQ+ DS++ L+ F + ++++ +V++CYEA VI FL+L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ G Y S ++ TII NISVSLALY+L +FY + L+P+ P+ KF +K ++F FWQG++L IL G I Sbjct: 68 HLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEAFVIYNFLSLCYEYLG---GESAIMSEIRGKAIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVILQAFGKYRDGDFDVTSGYLY--VTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAI 275
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184A_MOUSE (Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24 Identity = 82/250 (32.80%), Postives = 125/250 (50.00%), Query Frame = 1 Query: 31 FLTRILATMNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCI 756 FLT LA V+ + ++LT H Q+ S H S+ P+EQ+ DS++ L+ G ++++ +SV++CYEA VI FL L + YL ++ + EI+G+ I S R + L+ K T QF +++PV +++ I LQ Y S ++ T++ N SVSLALY+L +FY L P +P+ KFL IK I+F FWQG++L IL G I Sbjct: 52 FLTSALAR----GVSGVFVWTALLLTGH---QIYS-HLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYLY--VTLVYNASVSLALYALFLFYFATRDLLRPFEPVLKFLTIKAIIFLSFWQGMLLAILERCGVI 287
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184A_HUMAN (Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24 Identity = 72/214 (33.64%), Postives = 110/214 (51.40%), Query Frame = 1 Query: 139 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCI 756 H S+ P+EQ+ DS++ L+ G ++++ +SV++CYEA VI FL+L + YL + + EI+G+ I S R + L+ K T QF +++PV ++ I LQ G Y S ++ T+I N SVSLALY+L +FY + L P +P+ KFL IK ++F FWQG++L IL G I Sbjct: 77 HLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSFLSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAVTTIILQAFGKYHDGDFNVRSGYLY--VTLIYNASVSLALYALFLFYFTTRELLRPFQPVLKFLTIKAVIFLSFWQGLLLAILERCGVI 284
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184C_MOUSE (Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24 Identity = 69/240 (28.75%), Postives = 121/240 (50.42%), Query Frame = 1 Query: 73 TFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCIKSHHFW 774 ++ A + ++LT S + +H + + +P+ QK DS+V L+ +++++ +ECYEA VI F+ L +YL I I+ E K + +H P+ P + L K Q+ V+RP+ ++ + ++L +Y +WT+ +ILN +S A+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ +++ +LV G I W Sbjct: 48 SWFIAGIFLLLTIPVSLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWVALV----YPKIAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLILHLEAKDQQ-NHILPLCCCPPWA--MGEMLLFRCKLGVLQYTVVRPITTVTALVCEILDVYDEGNFGFSNAWTYLVILNNLSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVLIALLVKLGVISEKRTW 280
BLAST of FC930014 vs. ExPASy Swiss-Prot
Match: T184A_RAT (Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24 Identity = 82/250 (32.80%), Postives = 125/250 (50.00%), Query Frame = 1 Query: 31 FLTRILATMNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGRDIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVAFGCI 756 FLT LA V+ + ++LT H Q+ S H S+ P+EQ+ DS++ L+ G ++++ +SV++CYEA VI FL L + YL ++ + EI+G+ I S R + L+ K T QF +++PV +++ I LQ Y S ++ T++ N SVSLALY+L +FY L P +P+ KFL IK I+F FWQG++L IL G I Sbjct: 52 FLTSALAR----GVSGVFVWTALLLTGH---QIYS-HLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYLY--VTLVYNASVSLALYALFLFYFATRDLLRPFEPVLKFLTIKAIIFLSFWQGMLLAILERCGVI 287 The following BLAST results are available for this feature:
BLAST of FC930014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930014 ID=FC930014; Name=FC930014; organism=Citrus clementina; type=EST; length=774bpback to top |