FC930016

Overview
NameFC930016
Unique NameFC930016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:192..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: VTC4_ARATH (Inositol-phosphate phosphatase OS=Arabidopsis thaliana GN=VTC4 PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.689e-82
Identity = 145/180 (80.56%), Postives = 163/180 (90.56%), Query Frame = 3
Query:  120 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRI 659
            MA NDSL +FL  A+DAAK+AG+IIR GFY+TK+VEHKGQVDLVTETDK CE+L+FNHLKQ FP HKFIGEETTAA G TELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P+VGVVYNPIM+ELFTGV G+GAF NGK IKVS+Q+EL+ +LL TEAGTKRDK TLD +TNRI
Sbjct:    1 MADNDSLDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPIMEELFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTNRI 180          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMP3_SOLLC (Inositol monophosphatase 3 OS=Solanum lycopersicum GN=IMP3 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.206e-82
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 3
Query:  120 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRI 659
            MAQN S+ +FLD AV+AAK+AGEIIR GFY+TK+VEHKG VDLVTETDKACED IFNHLKQ+FP+HKFIGEETTAACG  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P VGVVYNPI+DELFTG+ G+GAF NGKPIKVSSQ+ELVK+LLATEAGT RDK  +DA+T RI
Sbjct:    1 MAQNGSVEQFLDVAVEAAKKAGEIIREGFYKTKHVEHKGMVDLVTETDKACEDFIFNHLKQRFPSHKFIGEETTAACGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPTVGVVYNPIIDELFTGIDGKGAFLNGKPIKVSSQSELVKALLATEAGTNRDKLVVDATTGRI 180          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPP_MESCR (Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.008e-80
Identity = 146/180 (81.11%), Postives = 157/180 (87.22%), Query Frame = 3
Query:  120 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRI 659
            MA N  L+ FL TAVDAAKRAGE+IR GFY  KNVEHKGQVDLVTETDK+CED+IFN LKQQ+P HKFIGEETTAA GATELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P VGVVYNPIM+ELFTGV  QGAF NG PI VSS+ ELV  LL TE GTKRDK T+DA+TNRI
Sbjct:    1 MAANVPLSDFLATAVDAAKRAGEVIRKGFYVKKNVEHKGQVDLVTETDKSCEDIIFNCLKQQYPNHKFIGEETTAAYGATELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPTVGVVYNPIMNELFTGVRRQGAFLNGVPIHVSSKDELVNCLLVTEVGTKRDKSTVDATTNRI 180          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMP1_SOLLC (Inositol monophosphatase 1 OS=Solanum lycopersicum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.306e-78
Identity = 140/180 (77.78%), Postives = 160/180 (88.89%), Query Frame = 3
Query:  120 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRI 659
            MA+N SL +FL  AVDAAKRAGEIIR GF++TK+V HKGQVDLVTETDKACEDLIFNHLKQ FP+HKFIGEET+AA G  +LTDEPTWIVDP+DGTTNFVHGFP VC+SIGLTIGKIP VGVVY+PI+DELFTG++G+GA+ NGKPIKVSSQ+ELVKSLL TE GT RD  T++ +T RI
Sbjct:    1 MARNGSLEEFLGVAVDAAKRAGEIIRKGFHETKHVVHKGQVDLVTETDKACEDLIFNHLKQHFPSHKFIGEETSAATGDFDLTDEPTWIVDPVDGTTNFVHGFPSVCVSIGLTIGKIPTVGVVYDPIIDELFTGINGKGAYLNGKPIKVSSQSELVKSLLGTEVGTTRDNLTVETTTRRI 180          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMP2_SOLLC (Inositol monophosphatase 2 OS=Solanum lycopersicum GN=IMP2 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.213e-72
Identity = 130/175 (74.29%), Postives = 156/175 (89.14%), Query Frame = 3
Query:  138 LAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAAC-GATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRI 659
            + +F+D A++AAK+AGEIIR+GFY++K++EHKG VDLVTETDKACE LIFNHLKQ FP+HKFIGEETTAA  G  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P+VGVVYNPI+DELFT ++G+GAF NGK I+VSS+++LVK+L+ATE GT RDK  +DA+T RI
Sbjct:    1 MEEFVDVAIEAAKKAGEIIRHGFYKSKHIEHKGVVDLVTETDKACEVLIFNHLKQCFPSHKFIGEETTAAASGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPVVGVVYNPIIDELFTAIYGRGAFLNGKSIRVSSESQLVKALVATEVGTNRDKAIVDATTGRI 175          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_BOVIN (Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.145e-39
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 3
Query:  132 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            D   + +D AV  A +AGE++R       N+  K    DLVT TD+  E ++   +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    G+VY+ + D+++TG  G+GAF NG+ ++VS Q ++ KSLL TE G+ R   T+
Sbjct:    3 DPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETV 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_PIG (Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.955e-38
Identity = 78/170 (45.88%), Postives = 113/170 (66.47%), Query Frame = 3
Query:  132 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            D   + +D AV  A++AGEI+R       N+  K    DLVT TD+  E ++ + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    GVVY+ + D+++TG  G+GAF +G+ ++VS Q ++  SLL TE G+ R   T+
Sbjct:    3 DPWQECMDYAVTLARQAGEIVREALKNEMNIMIKSSPADLVTATDEKVEKMLISSIKEKYPSHSFIGEESVAAGEKSVLTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKGMEFGVVYSCMEDKMYTGRKGRGAFCDGQKLQVSPQKDVTNSLLVTELGSSRTPETV 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_RAT (Inositol monophosphatase 1 OS=Rattus norvegicus GN=Impa1 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.704e-38
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 3
Query:  132 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            D   + +D AV  A++AGE+IR       +V  K    DLVT TD+  E ++ + +K+++P H FIGEE+ A+   T  T++PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ + D+++TG  G+GAF NG+ ++VS Q ++ KSLL TE G+ R   TL
Sbjct:    3 DPWQECMDYAVILARQAGEMIREALKNKMDVMIKSSPADLVTVTDQKVEKMLMSSIKEKYPYHSFIGEESVASGEKTVFTEQPTWIIDPIDGTTNFVHRFPFVAVSIGFVVNKEMEFGVVYSCVEDKMYTGRKGKGAFCNGQKLRVSQQEDITKSLLVTELGSSRKPETL 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA2_RAT (Inositol monophosphatase 2 OS=Rattus norvegicus GN=Impa2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.267e-37
Identity = 80/163 (49.08%), Postives = 108/163 (66.26%), Query Frame = 3
Query:  153 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            + AV  A RAG+IIR    + K+V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG  GQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKHVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTL 185          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA2_MOUSE (Inositol monophosphatase 2 OS=Mus musculus GN=Impa2 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.655e-37
Identity = 80/163 (49.08%), Postives = 107/163 (65.64%), Query Frame = 3
Query:  153 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            + AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG  GQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTL 185          
The following BLAST results are available for this feature:
BLAST of FC930016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
VTC4_ARATH1.689e-8280.56Inositol-phosphate phosphatase OS=Arabidopsis thal... [more]
IMP3_SOLLC2.206e-8281.67Inositol monophosphatase 3 OS=Solanum lycopersicum... [more]
IMPP_MESCR6.008e-8081.11Inositol monophosphatase OS=Mesembryanthemum cryst... [more]
IMP1_SOLLC4.306e-7877.78Inositol monophosphatase 1 OS=Solanum lycopersicum... [more]
IMP2_SOLLC1.213e-7274.29Inositol monophosphatase 2 OS=Solanum lycopersicum... [more]
IMPA1_BOVIN5.145e-3945.88Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 ... [more]
IMPA1_PIG1.955e-3845.88Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 ... [more]
IMPA1_RAT9.704e-3845.88Inositol monophosphatase 1 OS=Rattus norvegicus GN... [more]
IMPA2_RAT1.267e-3749.08Inositol monophosphatase 2 OS=Rattus norvegicus GN... [more]
IMPA2_MOUSE1.655e-3749.08Inositol monophosphatase 2 OS=Mus musculus GN=Impa... [more]

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Properties
Property NameValue
Genbank descriptionC34002H05EF PostHarvC1 Citrus clementina cDNA clone C34002H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930016 ID=FC930016; Name=FC930016; organism=Citrus clementina; type=EST; length=673bp
GAGCTCAAAACGAAGCACAACCTGTCATTACCACCATCATCACTCATCAG
CTCGCTGTCCCTTCTCTTCTCGTTCTTCTCTTTAATTTTTTAATCCTGTA
TAATAAAAAATATACCCATATGGCACAAAATGATTCGCTTGCAAAGTTCT
TGGACACTGCAGTTGATGCAGCTAAGAGGGCTGGCGAGATAATCCGTAAT
GGGTTCTATCAAACCAAAAATGTGGAGCATAAAGGCCAGGTGGATTTGGT
CACAGAAACTGATAAAGCATGTGAGGATCTCATATTTAATCATCTCAAGC
AGCAATTTCCCACGCATAAGTTCATTGGAGAAGAAACTACCGCTGCTTGT
GGTGCCACAGAGTTGACCGATGAACCCACATGGATTGTCGATCCTCTTGA
TGGAACAACTAACTTTGTGCATGGGTTTCCCTTTGTGTGTATCTCTATCG
GTCTTACAATTGGAAAGATTCCTATTGTCGGGGTTGTCTACAATCCAATA
ATGGATGAGCTTTTTACTGGAGTCCATGGACAAGGTGCATTTTTTAATGG
AAAACCTATAAAAGTATCATCTCAAACTGAACTAGTAAAGTCTCTCCTCG
CAACAGAGGCTGGAACAAAACGTGATAAGCCAACTCTGGATGCTTCTACA
AATAGAATCATAGCTTGCTATTC
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