FC930020

Overview
NameFC930020
Unique NameFC930020
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig865 contig Ccv1_Contig865:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.536e-78
Identity = 140/199 (70.35%), Postives = 157/199 (78.89%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            ME+FPVI++E +NG ERAA +  IN+ACENWGFFE VNHGI PE MDTVER+TKAHY+KCMEQRFKELVAS+ALEGIQ EV DMDWEST+++RHLPQS I+EVPDLDEEYR+VM                          GYLKK F+G  GP FGTKV+NYPPCPK DLIKGLRAHTDAGGIILLFQDDKVSGLQLL+
Sbjct:    1 MESFPVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVTDMDWESTYFLRHLPQSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 2.994e-77
Identity = 137/199 (68.84%), Postives = 155/199 (77.89%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+ISL+ +NG ERAA +E I +ACENWGFFE VNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ALEG+Q EV DMDWESTF+++HLP S I+EVPDLDEEYR+VM                          GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL+
Sbjct:    1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.941e-76
Identity = 134/199 (67.34%), Postives = 156/199 (78.39%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+I+LE +NG  R A +EKI +ACENWGFFE V+HGI  EF+DTVERLTK HYR+C+EQRFKELVAS+ LE ++TEVNDMDWESTFY+RHLP+S I+EVPDL+++YR VM                          GYLKK F+G NGPTFGTKVSNYPPCP P+LIKGLRAHTDAGG+ILLFQDDKVSGLQLL+
Sbjct:    1 MENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 5.646e-76
Identity = 135/199 (67.84%), Postives = 153/199 (76.88%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+I+LEN+NG ERA  +E I +ACENWGFFE VNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM                          GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL+
Sbjct:    1 MENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 5.646e-76
Identity = 135/199 (67.84%), Postives = 154/199 (77.39%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+I+LE +NG+ER A +E I +ACENWGFFE VNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM                          GYLKK F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL+
Sbjct:    1 MENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.258e-75
Identity = 133/199 (66.83%), Postives = 153/199 (76.88%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+I+LE +NGAER A +EKIN+ACENWGFFE VNHGI  E MDTVE+LTK HY+KCMEQRFKELVA + LEG++ EV DMDWESTF++RHLP S I+++PDLD+ YR+VM                           YLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL+
Sbjct:    1 MENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.643e-75
Identity = 135/199 (67.84%), Postives = 153/199 (76.88%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+I+LEN+ GAER A +E I +ACENWGFFE VNHGI  E MDTVE+ TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM                          GYLKK F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL+
Sbjct:    1 MENFPIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 6.242e-75
Identity = 133/199 (66.83%), Postives = 152/199 (76.38%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+I+LE +NG ERA  +E I +ACENWGFFE VNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM                          GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL+
Sbjct:    1 MENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.372e-74
Identity = 131/199 (65.83%), Postives = 153/199 (76.88%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            MENFP+I+LE +NG+ERA  +E I +ACENWGFFE VNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I EVPDLD++YR+VM                          GYLKK+F+G  GP FG+KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKV+GLQLL+
Sbjct:    1 MENFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLK 199          
BLAST of FC930020 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.008e-73
Identity = 128/199 (64.32%), Postives = 153/199 (76.88%), Query Frame = 2
Query:   83 MENFPVISLENINGAERAAILEKINEACENWGFFEPVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLR 679
            ME FPVI +E +NG ERA  +EKI +ACENWGFFE VNHGI  E MDTVERLTK HY KCMEQRFKE+VA++ LE +Q+E+ND+DWESTF++RHLP S I+E+PDL++++RK M                          GYLKK F+G+ GPTFGTKVSNYPPCP+P+LIKGLRAHTDAGGIILLFQD+KVSGLQLL+
Sbjct:    1 MEAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLK 199          
The following BLAST results are available for this feature:
BLAST of FC930020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ACCO_DIOKA3.536e-7870.351-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_PETHY2.994e-7768.841-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_PRUMU1.941e-7667.341-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO4_SOLLC5.646e-7667.841-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO3_PETHY5.646e-7667.841-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO2_SOLLC1.258e-7566.831-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO4_PETHY1.643e-7567.841-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC6.242e-7566.831-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_TOBAC2.372e-7465.831-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_ACTDE2.008e-7364.321-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

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Properties
Property NameValue
Genbank descriptionC34002H09EF PostHarvC1 Citrus clementina cDNA clone C34002H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930020 ID=FC930020; Name=FC930020; organism=Citrus clementina; type=EST; length=696bp
GACTAATTAACAAGCTCACAAACACATACACAAACACAAACACTCACAAA
CACACAGCTTGTTAAAGAAAGAATTCAGAGATATGGAGAACTTCCCCGTT
ATCAGCTTGGAGAACATCAATGGTGCTGAAAGAGCGGCTATCTTGGAGAA
GATCAACGAGGCCTGTGAGAACTGGGGCTTCTTTGAGCCGGTGAATCATG
GAATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCAAGGCGCAT
TACAGAAAATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCAAGCAGGGC
ACTTGAAGGTATCCAAACCGAGGTCAATGACATGGACTGGGAAAGCACTT
TCTATGTGCGTCACCTCCCTCAGTCGACCATCAATGAAGTCCCAGATCTT
GATGAGGAATACAGGAAGGTGATGAAGGAATTTGCATTGAAATTGGAGAA
ATTAGCAGAGGAGCTATTGGACTTGTTATGCGAGAATCTTGGATTAGAGA
AGGGGTACTTGAAAAAGGTCTTTCATGGGGCAAACGGACCAACCTTTGGT
ACCAAAGTTAGCAACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGG
TCTCCGGGCTCACACCGACGCCGGCGGCATCATCTTGCTCTTCCAGGATG
ACAAAGTCAGTGGCCTTCAGCTTCTTAGATGGCCAGTGGATTGATG
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