FC930022

Overview
NameFC930022
Unique NameFC930022
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10913 contig Ccv1_Contig10913:775..1493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.484e-34
Identity = 83/198 (41.92%), Postives = 115/198 (58.08%), Query Frame = 3
Query:   75 MALEKGRVCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCRT---TNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            M  E   VCVTGA G++ SW+V  LL   Y VR TVR+P+++K   HL  L KA  +L L+KADL D  S   AI GC+GVFH               E+I+P + G L++LKAC +AK  R +V +S A   +N    +  + DE+ WSD E+CR+   T   Y +SKT AE  A ++AK   +D +T+ P L++GP
Sbjct:    1 MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFH-VATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGT-VNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGP 196          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.484e-34
Identity = 83/198 (41.92%), Postives = 115/198 (58.08%), Query Frame = 3
Query:   75 MALEKGRVCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCRT---TNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            M  E   VCVTGA G++ SW+V  LL   Y VR TVR+P+++K   HL  L KA  +L L+KADL D  S   AI GC+GVFH               E+I+P + G L++LKAC +AK  R +V +S A   +N    +  + DE+ WSD E+CR+   T   Y +SKT AE  A ++AK   +D +T+ P L++GP
Sbjct:    1 MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFH-VATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGT-VNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGP 196          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33
Identity = 80/198 (40.40%), Postives = 113/198 (57.07%), Query Frame = 3
Query:   75 MALEKGRVCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCRT---TNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            M  +   VCVTGA G++ SW+V  LL +   VR TVR+P++ K   HL  L KA  +L L+KADL D  S   AI GC GVFH               E+I+P ++G L ++K+C  AK  R +V +S A   +N +  +  + DE+CWSD E+CR    T   Y +SKT AE  A ++AK   +D +T+ P L++GP
Sbjct:    1 MGSQSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH-VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGT-VNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGP 196          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.894e-32
Identity = 82/198 (41.41%), Postives = 114/198 (57.58%), Query Frame = 3
Query:   78 ALEKGRVCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSD-EKNTHLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEA-KVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCR---TTNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            A EKG V VTGA G++ SW+V  LL   Y VR TVR+P++  K   L  L  A+E L ++KADL +  S   AI GC GVFH               E+I+P V+G +++++AC EA  V+R++  SS   V L  R  +  + DE  W+D ++CR    T   Y +SKT AE  AL +A   GLD+VT+ P L++GP
Sbjct:    7 ASEKGTVLVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVGKTKPLMDLPGATERLSIWKADLAEEGSFHDAIRGCTGVFH-VATPMDFLSKDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTVNLEER--QRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGP 201          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.894e-32
Identity = 81/198 (40.91%), Postives = 112/198 (56.57%), Query Frame = 3
Query:   75 MALEKGRVCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSD-EKNTHLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYC---RTTNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            M  +K  VCVTGA G++ SW+V  LL + YFVR TVR+P + +K  HL  L  A   L L+KADL +  S   AI GC+GVFH               E+I+P V G L ++KAC++AK  R  V +S A   +N    +  + DE  WSD E+    + T   Y +SKT AE  A +FA+  GLD +++ P L++GP
Sbjct:    1 MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFH-VATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGT-VNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGP 196          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.004e-32
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   96 VCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCRT---TNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            VCVTGA G++ SW++  LL + Y VR TVR+P + K   HL  L  A  NL L+KADL +  S  +A+ GC GVFH               E+I+P + G L++LK+C++AK++RV+  SSG  V  N    +  + DETCWS  ++ R+   T   Y +SK  AE  A ++A    L+ +++ P L++GP
Sbjct:   25 VCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKADLHEEGSFDAAVDGCTGVFH-IATPMDFESKDPENEMIKPTINGMLDILKSCVKAKLRRVVFTSSGGTV--NVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGP 212          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.536e-31
Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 3
Query:   87 KGRVCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSD-EKNTHLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEA-KVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCR---TTNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            KG V VTGA G++ SW+V  LL   Y VR TVR+P++ EK   L +L  A E L ++KADL +  S   AI GC GVFH               E+I+P V+G L++++AC EA  VKR++  SS  +V +  R P+    D+  WSD +YCR    T   Y +SK  AE  A+E+A   GLD +++ P L++GP
Sbjct:    5 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSEDGSFNEAIAGCTGVFH-VATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEER-PR-PAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGP 196          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31
Identity = 77/191 (40.31%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   96 VCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKE--YCRTTNNW-YCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            VCVTGA G++ SW+V  LL + Y VR TVR P D K   HL +L KA  NL L+KADL    S   AI GC+GVFH               E+I+P ++G L+++++C +AK  + +V +S A   +N +  +  + DE+ WSD +  Y +    W Y +SKT AE  A+E AK   +D V++ P L++GP
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADLTQEGSFDEAIEGCHGVFH-VATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGT-VNVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGP 197          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31
Identity = 84/192 (43.75%), Postives = 114/192 (59.38%), Query Frame = 3
Query:   93 RVCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKN-THLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAK-VKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCRTTN--NW-YCLSKTEAESEALEFAKRTGLDVVTVCPNLILG 653
            + CV G  G LAS ++K LL   Y V  TVR+P +EK   HL KL++  + LK+FKADL D DS +S+  GC  +FH               ++I+PA++G +NVLK+CL++K VKRVI  SS AAV +N     G +M+E  W+D E+       NW Y +SK  AE  A EFAK   +++VTV P LI G
Sbjct:   12 KACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGD-LKIFKADLTDEDSFESSFSGCEYIFH-VATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAG 201          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29
Identity = 73/191 (38.22%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   96 VCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSD-EKNTHLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKE--YCRTTNNW-YCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            VCVTGA G++ SW+V  LL + Y V  TVR+P D +K  HL +L KA  NLKL+KADL    S   AI GC+GVFH               E+I+P ++G L+++++C++AK  + +V +S A   +N +  +  + DE+ WSD +  Y +    W Y +SKT AE  A +  K   +  +++ P L++GP
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQEGSFDEAIQGCHGVFH-LATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGT-VNGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGP 197          
The following BLAST results are available for this feature:
BLAST of FC930022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
DFRA_PYRCO1.484e-3441.92Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MALDO1.484e-3441.92Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_VITVI6.235e-3340.40Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_MAIZE6.894e-3241.41Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_ARATH6.894e-3240.91Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_DIACA9.004e-3239.27Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_HORVU1.536e-3141.54Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_CALCH3.421e-3140.31Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
BAN_ARATH7.622e-3143.75Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
DFRA_GERHY1.101e-2938.22Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34002H12EF PostHarvC1 Citrus clementina cDNA clone C34002H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930022 ID=FC930022; Name=FC930022; organism=Citrus clementina; type=EST; length=719bp
GACAGACCCAGAAAGAGAGAAACAATCTTTTAAGTTAGTTTATAGACTTG
AGTGGGTGTTTTAAGGTTTTGGAAATGGCGTTAGAGAAAGGAAGAGTTTG
TGTAACAGGTGCTGGTGGGTATCTTGCCTCGTGGGTCGTCAAGCTCCTGC
TCTCCAAAGACTATTTTGTTCGTGGAACCGTGAGAGAACCCAGTGATGAG
AAAAATACTCATTTGTATAAACTTGAGAAAGCCTCTGAGAATCTGAAACT
CTTCAAGGCAGACTTACTGGATTATGATTCTGTTAAATCTGCCATTGTTG
GATGCAACGGTGTATTCCATGTTGCTAGCCCTGTTCCATCATCCAGTGTT
CCAAATCCTGAGGTGGAACTGATTGAGCCGGCTGTAAAGGGCACACTCAA
TGTGCTCAAAGCATGTCTTGAGGCAAAAGTTAAGCGAGTTATTGTAGTGT
CTTCTGGAGCTGCTGTTGGCCTGAACCCCAGATGGCCCAAGGGCCAAATT
ATGGATGAGACTTGTTGGTCTGATAAGGAATACTGCAGAACAACGAATAA
CTGGTACTGTCTTTCAAAAACCGAAGCAGAAAGTGAAGCTCTGGAGTTTG
CAAAAAGAACTGGGCTTGATGTTGTAACCGTTTGTCCTAACCTTATTTTG
GGGCCTCTTCTGCAGTCCACGTGAATTCAGTAGCTTATTCTCATTAGCGA
TTGAAGAAGGTATGATCAT
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