FC930023

Overview
NameFC930023
Unique NameFC930023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10285 contig Ccv1_Contig10285:2..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.194e-87
Identity = 152/215 (70.70%), Postives = 176/215 (81.86%), Query Frame = 2
Query:   59 MANE-VVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAL-LLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSAMR 697
            MANE V+LLDFWPSMFG+R+RIALAEK +KYEYKEEDL+NKSPLLLQMNP+HKKIPVLIHNG+P CES I V+YI+EVWKDKA  LLPSDPY RAQARFW D+IDKK+YD  RK WTTKG             LK LEG LGDKP+FGG++FG+VD++LI +Y WFY YET G F+ EAECPKF+AW KRC+QRE+VAK+LPD  KV EFV  +R
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLR 215          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.739e-87
Identity = 150/215 (69.77%), Postives = 175/215 (81.40%), Query Frame = 2
Query:   59 MANE-VVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKA-LLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSAMR 697
            MANE V+LLDFWPSMFG+R+RIALAEK +KYEYK+EDL+NKSPLLLQMNP+HKKIPVLIHNG+P CES I V+YI+EVWKDKA  LLPSDPY RAQARFW D+IDKK+YD  RK W TKG             LK LEG LGD+P+FGG++FG+VD++LI FY WFY YET G F+ EAECPKF+AW KRC+QRE+VAK+LPD  KV EFV  +R
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLR 215          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.288e-81
Identity = 137/209 (65.55%), Postives = 165/209 (78.95%), Query Frame = 2
Query:   59 MANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKALLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFV 685
            M++EVVLLD W SM+G+R RIALAEKGV+YEYKEE+L N+SPLLLQMNP+HKKIPVLIHNG+P CES IIVQYIDEVW DK+ L+PSDPY+R+QARFWVD+IDKK+YD+ +K W +KG            + K LE  L DKPF+G D FG+VDL LI F  WFYTYET G F +E ECPK +AWVKRC++RETV+  LPD KKV+  +
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLI 209          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.238e-76
Identity = 126/212 (59.43%), Postives = 165/212 (77.83%), Query Frame = 2
Query:   62 ANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKALLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSAMR 697
            +N VVLLDFWPS FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHN +  CES  I++YIDEVW DK  LLPSDPY+R+QARFW D+IDKK+Y + R+ W+ KG            +LKTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAECPK + W K C++ E+V+K+LP   K++ FV  ++
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELK 214          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.046e-71
Identity = 121/212 (57.08%), Postives = 162/212 (76.42%), Query Frame = 2
Query:   62 ANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKALLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSAMR 697
            +N VVLLDF  S FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHNG+P CES  I++YIDEVW +K  LLPSDPYQR+QARFW ++ID K+Y + R+ W+ KG            + KTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAEC K + W + C++ E V+K+LP   K+++FV  ++
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELK 213          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.288e-57
Identity = 107/220 (48.64%), Postives = 146/220 (66.36%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKALLLP-------SDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSAMR 697
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRP  ES +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++V K LP  +KV++FV  ++
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLK 225          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.196e-57
Identity = 108/220 (49.09%), Postives = 149/220 (67.73%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKA-LLLPSD------PYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSAMR 697
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRP  ES +I+QY+D+ +     LL P++       Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++VAK LP  +KV++FV  ++
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLK 225          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.087e-38
Identity = 93/210 (44.29%), Postives = 121/210 (57.62%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKALLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYET-CGKFNVEAE-CPKFIAWVKRCLQRETVAKALPDGKKVFEFVSA 691
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPV+KK+PVLIHNG+P  ES II++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++  T+  KG            +LK L+ +L DK FF GD FG+ D++      W   +E   G   V++E  P F  W    +    V ++LP   ++  F  A
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRA 210          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.133e-37
Identity = 91/208 (43.75%), Postives = 122/208 (58.65%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKALLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDL--SLIPFYCWFYTYETCGKFNVEAE-CPKFIAWVKRCLQRETVAKALPDGKKVFEF 682
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NP+HKK+PVLIHNG+   ES +I++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++ KT+  KG            +LK L+ +L DK FF GD FG+ D+  +L+ F+   +  E  G   V +E  P F  W    +    + ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE-EASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of FC930023 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37
Identity = 92/210 (43.81%), Postives = 119/210 (56.67%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKALLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYET-CGKFNVEAE-CPKFIAWVKRCLQRETVAKALPDGKKVFEFVSA 691
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPVHKK+PVLIHNG+P  ES +I++YIDE ++  + +LP DPY RA ARFW  F+  K+  ++  T+  KG            +LK L+ +L DK FF GD FG+ D++      W   +E   G   V +E  P F  W    +    V ++LP   ++  F  A
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWSKFLGDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRA 210          
The following BLAST results are available for this feature:
BLAST of FC930023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX4_TOBAC1.194e-8770.70Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC7.739e-8769.77Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN8.288e-8165.55Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC1.238e-7659.43Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL2.046e-7157.08Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ1.288e-5748.64Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI2.196e-5749.09Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC5.087e-3844.29Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC1.133e-3743.75Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC7.345e-3743.81Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionC34003A01EF PostHarvC1 Citrus clementina cDNA clone C34003A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930023 ID=FC930023; Name=FC930023; organism=Citrus clementina; type=EST; length=731bp
GGTGTTTGTCTTGTCTTTTCATTTATTCACTCTTGACTCTTAGTAAGCTT
CTGTCACAATGGCGAACGAAGTGGTTCTGTTGGATTTCTGGCCCAGCATG
TTTGGGATAAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTATGA
GTACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATGA
ACCCCGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGTTC
TGTGAGTCACCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGACAA
GGCTCTATTGCTTCCCTCTGATCCCTACCAGAGAGCTCAAGCTAGGTTCT
GGGTAGATTTCATTGACAAGAAGATGTACGATTCTTTGAGGAAGACATGG
ACCACAAAGGGAGAAGAGCAGGAGGCAGCTAAGAAGGAGTTCTTTGAAGT
TCTGAAGACTTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGGAG
ACAATTTTGGGTATGTGGATTTAAGTTTGATCCCATTCTATTGTTGGTTT
TACACGTATGAGACATGTGGAAAGTTCAACGTCGAGGCTGAGTGCCCCAA
GTTCATAGCTTGGGTGAAGAGATGCTTGCAGAGGGAGACTGTTGCCAAGG
CACTTCCTGATGGGAAGAAAGTGTTTGAATTTGTTTCAGCGATGAGGACA
ATTTAGGATTGGAGTAGAGAGAAAAAGGACA
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