FC930035

Overview
NameFC930035
Unique NameFC930035
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1, chloroplastic OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.798e-89
Identity = 157/210 (74.76%), Postives = 176/210 (83.81%), Query Frame = 2
Query:   98 ISQTTSCLLSKTPFALKHKSH---ITNLCFGTKGVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPR 718
            ++QTTSC L+K  F L  K        LCF  + +   SKR FSC AIYNPQV++ EEG  E+LDYRVFF++ SGKKVSPWHDIPL LGDGVFNF+VEIPKES AKMEVATDE +TPIKQD KKGKLRYYPYNINWNYGL PQTWEDPS ANSEVEG FGDNDPVDVVEIGE +RKIG+IL+++PL+ALAMIDEGELDWKIVAISLDDP+
Sbjct:   13 VTQTTSCFLAKQAFTLPAKKSCGGFGGLCFSRRALVLKSKRPFSCSAIYNPQVKVQEEGPAESLDYRVFFLDGSGKKVSPWHDIPLTLGDGVFNFIVEIPKESKAKMEVATDEDFTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQRKIGDILKIKPLAALAMIDEGELDWKIVAISLDDPK 222          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR1_CHLRE (Soluble inorganic pyrophosphatase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ppa1 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.450e-53
Identity = 97/156 (62.18%), Postives = 123/156 (78.85%), Query Frame = 2
Query:  251 ITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPR 718
            + E+G  ++L+YR+FF     K+VS WH+IPL  GDG  +++ EIPKE+SAKMEVATDE  TPIKQD+KKGKLR+YPYNINWNYG+ PQTWEDP   ++ + GA GDNDPVDVVEIG    K G + +V+P+  LAMID+GELDWK++AIS DDP+
Sbjct:   48 VEEKGPKDSLEYRMFF-KQGAKEVSCWHEIPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRFYPYNINWNYGMLPQTWEDPGHTDATL-GAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMIDDGELDWKVIAISADDPK 201          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_MOUSE (Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.361e-43
Identity = 86/158 (54.43%), Postives = 110/158 (69.62%), Query Frame = 2
Query:  257 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            E   P TL+YRVF  N  G+ +SP+HD+P+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP  ++    G  GDNDP+DV EIG +    GEI+RV+ L  LAMIDEGE DWK++AI++DDP
Sbjct:    8 ERAAPFTLEYRVFLKNEKGQYISPFHDVPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHT-GCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDP 164          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_BOVIN (Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.031e-43
Identity = 87/158 (55.06%), Postives = 110/158 (69.62%), Query Frame = 2
Query:  257 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            E   P TL+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+RV+ L  LAMIDEGE DWK++AI+++DP
Sbjct:    8 ERAAPFTLEYRVFLKNEKGQYISPFHDIPIYADKEVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVEDP 164          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_MACFA (Inorganic pyrophosphatase OS=Macaca fascicularis GN=PPA1 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.504e-42
Identity = 86/158 (54.43%), Postives = 109/158 (68.99%), Query Frame = 2
Query:  257 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            E   P +L+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ V+ L  LAMIDEGE DWK++AI++DDP
Sbjct:    8 ERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDP 164          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_HUMAN (Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.504e-42
Identity = 86/158 (54.43%), Postives = 109/158 (68.99%), Query Frame = 2
Query:  257 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            E   P +L+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ V+ L  LAMIDEGE DWK++AI++DDP
Sbjct:    8 ERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDP 164          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_PONAB (Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.751e-42
Identity = 85/158 (53.80%), Postives = 108/158 (68.35%), Query Frame = 2
Query:  257 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            E   P +L+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KK KLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ V+ L  LAMIDEGE DWK++AI++DDP
Sbjct:    8 ERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKRKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINMDDP 164          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR2_HUMAN (Inorganic pyrophosphatase 2, mitochondrial OS=Homo sapiens GN=PPA2 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.835e-38
Identity = 82/175 (46.86%), Postives = 110/175 (62.86%), Query Frame = 2
Query:  257 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG-----------------DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            E GQP + +YR+FF N +G  +SP+HDIPL++                  + +FN +VEIP+ ++AKME+AT E   PIKQ +K GKLRY    +PY    WNYG  PQTWEDP   +      FGDNDP+DV EIG +    GE++ V+ L  LA+IDEGE DWK++AI+ +DP
Sbjct:   39 ERGQPCSQNYRLFFKNVTGHYISPFHDIPLKVNSKEENGIPMKKARNDEYENLFNMIVEIPRWTNAKMEIATKEPMNPIKQYVKDGKLRYVANIFPYKGYIWNYGTLPQTWEDPHEKDKSTN-CFGDNDPIDVCEIGSKILSCGEVIHVKILGILALIDEGETDWKLIAINANDP 212          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_ASHGO (Inorganic pyrophosphatase OS=Ashbya gossypii GN=IPP1 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.541e-38
Identity = 82/161 (50.93%), Postives = 111/161 (68.94%), Query Frame = 2
Query:  263 GQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDG--VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPRLP 724
            G   TLDYRVF +  +GK VSP+HDIPL   +   +FN VVEIP+ ++AK+E+  +E   PI QD KKGKLRY    +P++    NYG FPQTWEDP+ A+ E + A+GDNDP+DV+EIGE     G++ +V+ L  +A++DEGE DWKI+ I + DP  P
Sbjct:    9 GAKNTLDYRVF-IEKAGKVVSPFHDIPLYADEENQIFNMVVEIPRWTNAKLEITKEEAMNPIIQDTKKGKLRYVRNCFPHHGYIHNYGAFPQTWEDPNVAHPETK-AYGDNDPLDVLEIGETIAYTGQVKQVKVLGVMALLDEGETDWKIIVIDVHDPLAP 167          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_CANGA (Inorganic pyrophosphatase OS=Candida glabrata GN=IPP1 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.903e-37
Identity = 81/161 (50.31%), Postives = 110/161 (68.32%), Query Frame = 2
Query:  263 GQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPRLP 724
            G   TLDY+VF +   GK VSP+HDIPL     + +FN VVEIP+ ++AK+E+  +E   PI QD KKGKLRY    +P++    NYG FPQTWEDP+  + E + A GDNDPVDV+EIGE     G++ +V+ L  +A++DEGE DWK++AI ++DP  P
Sbjct:    9 GAKNTLDYKVF-IEEDGKPVSPFHDIPLYADKEENIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRYVRNCFPHHGYIHNYGAFPQTWEDPNQTHPETK-AVGDNDPVDVLEIGETIGYTGQVKQVKVLGIMALLDEGETDWKVIAIDINDPLAP 167          
The following BLAST results are available for this feature:
BLAST of FC930035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
IPYR1_ARATH2.798e-8974.76Soluble inorganic pyrophosphatase 1, chloroplastic... [more]
IPYR1_CHLRE1.450e-5362.18Soluble inorganic pyrophosphatase 1, chloroplastic... [more]
IPYR_MOUSE1.361e-4354.43Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 ... [more]
IPYR_BOVIN3.031e-4355.06Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE... [more]
IPYR_MACFA1.504e-4254.43Inorganic pyrophosphatase OS=Macaca fascicularis G... [more]
IPYR_HUMAN1.504e-4254.43Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 ... [more]
IPYR_PONAB9.751e-4253.80Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 ... [more]
IPYR2_HUMAN3.835e-3846.86Inorganic pyrophosphatase 2, mitochondrial OS=Homo... [more]
IPYR_ASHGO6.541e-3850.93Inorganic pyrophosphatase OS=Ashbya gossypii GN=IP... [more]
IPYR_CANGA1.903e-3750.31Inorganic pyrophosphatase OS=Candida glabrata GN=I... [more]

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Properties
Property NameValue
Genbank descriptionC34003B01EF PostHarvC1 Citrus clementina cDNA clone C34003B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930035 ID=FC930035; Name=FC930035; organism=Citrus clementina; type=EST; length=724bp
GAAAACACTTCCCAGTCAAATCTCCAAAACTCATTCCACTTTCTCACTGA
CTCCCACTCACAGTCGCCAGTCAGCAGCCATGGCAGCCGCAAAAGCGATA
AGCCAAACCACTTCTTGCTTGCTGTCCAAAACACCCTTTGCTCTGAAACA
CAAATCCCACATCACAAATCTTTGCTTTGGTACCAAAGGAGTTGCTTTTC
CGTCAAAGAGGCTGTTTTCATGTAGGGCTATTTATAATCCTCAGGTTCAA
ATCACAGAGGAGGGCCAGCCTGAAACTCTAGATTACAGAGTCTTTTTCGT
CAACAATTCTGGCAAAAAGGTTTCTCCCTGGCATGACATACCGCTGCAAT
TGGGTGACGGTGTTTTCAACTTTGTTGTTGAAATACCCAAAGAATCAAGT
GCAAAGATGGAGGTTGCTACTGATGAGCTATACACCCCTATTAAACAGGA
TATAAAGAAGGGGAAGCTTCGATACTACCCATACAACATAAATTGGAATT
ATGGATTGTTTCCACAAACATGGGAAGATCCATCTTTTGCAAACTCTGAA
GTTGAAGGGGCATTTGGGGATAATGATCCAGTTGATGTTGTTGAGATTGG
TGAAAGAAGGAGAAAGATTGGTGAAATTCTTAGGGTNCAGCCCTTGAGTG
CCTTAGCCATGATTGATGAAGGTGAACTTGACTGGAAAATAGTGGCAATT
TCATTGGATGATCCAAGGCTGCCC
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