FC930040

Overview
NameFC930040
Unique NameFC930040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10285 contig Ccv1_Contig10285:1..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.380e-89
Identity = 153/221 (69.23%), Postives = 179/221 (81.00%), Query Frame = 1
Query:   61 MANE-VVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNLGLE 717
            MANE V+L DFWPSMFG+R+RIALAEK +KYEYKEEDL+NKSPLLLQMNP+HKKIPVLIHNG+P CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+ID+K+YD  RK WTTKG             LK LEG LGDKP+FGG++FG+VD++LI +Y WFY YET G F+ EAECPKF+AW KRC+QRE+VA++LPD  KV EFV  +R   GLE
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.401e-88
Identity = 151/221 (68.33%), Postives = 178/221 (80.54%), Query Frame = 1
Query:   61 MANE-VVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNLGLE 717
            MANE V+L DFWPSMFG+R+RIALAEK +KYEYK+EDL+NKSPLLLQMNP+HKKIPVLIHNG+P CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+ID+K+YD  RK W TKG             LK LEG LGD+P+FGG++FG+VD++LI FY WFY YET G F+ EAECPKF+AW KRC+QRE+VA++LPD  KV EFV  +R   GLE
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.871e-81
Identity = 137/216 (63.43%), Postives = 168/216 (77.78%), Query Frame = 1
Query:   61 MANEVVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNL 708
            M++EVVL D W SM+G+R RIALAEKGV+YEYKEE+L N+SPLLLQMNP+HKKIPVLIHNG+P CES IIVQYIDEVW DK+PL+PSDPY+R+QARFWVD+ID+K+YD+ +K W +KG            + K LE  L DKPF+G D FG+VDL LI F  WFYTYET G F +E ECPK +AWVKRC++RETV+  LPD KKV+  +  ++  L
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQKTL 216          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.129e-77
Identity = 127/217 (58.53%), Postives = 168/217 (77.42%), Query Frame = 1
Query:   64 ANEVVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNLGL 714
            +N VVL DFWPS FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHN +  CES  I++YIDEVW DK PLLPSDPY+R+QARFW D+ID+K+Y + R+ W+ KG            +LKTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAECPK + W K C++ E+V+++LP   K++ FV  ++  LGL
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKLGL 219          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 8.372e-73
Identity = 123/217 (56.68%), Postives = 165/217 (76.04%), Query Frame = 1
Query:   64 ANEVVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNLGL 714
            +N VVL DF  S FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHNG+P CES  I++YIDEVW +K PLLPSDPYQR+QARFW ++ID K+Y + R+ W+ KG            + KTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAEC K + W + C++ E V+++LP   K+++FV  ++  LGL
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKLGL 218          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.460e-58
Identity = 108/226 (47.79%), Postives = 148/226 (65.49%), Query Frame = 1
Query:   70 EVVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLP-------SDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNLGLE 717
            E+VL DFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRP  ES +I+QY+D+ +     LLP          Y RA ARFW D++DRK+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++V + LP  +KV++FV  ++   G+E
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.935e-58
Identity = 109/226 (48.23%), Postives = 151/226 (66.81%), Query Frame = 1
Query:   70 EVVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLL-PSD------PYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNLGLE 717
            E+VL DFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRP  ES +I+QY+D+ +     LL P++       Y RA ARFW D++DRK+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++VA+ LP  +KV++FV  ++   G+E
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYGVE 231          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.544e-37
Identity = 92/210 (43.81%), Postives = 120/210 (57.14%), Query Frame = 1
Query:   70 EVVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYET-CGKFNVEAE-CPKFIAWVKRCLQRETVAQALPDGKKVFEFVSA 693
            EV L  FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPV+KK+PVLIHNG+P  ES II++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++  T+  KG            +LK L+ +L DK FF GD FG+ D++      W   +E   G   V++E  P F  W    +    V ++LP   ++  F  A
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRA 210          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 90/208 (43.27%), Postives = 121/208 (58.17%), Query Frame = 1
Query:   70 EVVLSDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDRKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDL--SLIPFYCWFYTYETCGKFNVEAE-CPKFIAWVKRCLQRETVAQALPDGKKVFEF 684
            EV L  FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NP+HKK+PVLIHNG+   ES +I++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++ KT+  KG            +LK L+ +L DK FF GD FG+ D+  +L+ F+   +  E  G   V +E  P F  W    +    + ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE-EASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of FC930040 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36
Identity = 85/207 (41.06%), Postives = 118/207 (57.00%), Query Frame = 1
Query:   97 SMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDRKMYDSLRKT-WTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV--EAECPKFIAWVKRCLQRETVAQALPDGKKVFEFVSAMRTNL 708
            S F  RV+IAL  KGV+Y++ EE+L NKS LLL+ NPVHKK+PV +HN +P  ES +IV+YIDE WK+  P+LPSDPYQRA ARFW  FID K+  ++ K+ +T                L+ LE +L DK FFGG+ FG VD++ +    W   ++      +    + P    W +  L    V + LP    +F +  A   +L
Sbjct:   16 SPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESL 221          
The following BLAST results are available for this feature:
BLAST of FC930040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTX4_TOBAC6.380e-8969.23Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC5.401e-8868.33Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN2.871e-8163.43Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC1.129e-7758.53Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL8.372e-7356.68Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ4.460e-5847.79Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI9.935e-5848.23Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC2.544e-3743.81Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC5.668e-3743.27Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN1.649e-3641.06Probable glutathione S-transferase OS=Glycine max ... [more]

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Properties
Property NameValue
Genbank descriptionC34003B06EF PostHarvC1 Citrus clementina cDNA clone C34003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930040 ID=FC930040; Name=FC930040; organism=Citrus clementina; type=EST; length=734bp
GGCGTGTTTGTCTTGTCTTTTCATTTATTCACTCTTGACTCTTAGTAAGC
TTCTGTCACAATGGCGAACGAAGTGGTTCTGTCGGATTTCTGGCCCAGCA
TGTTTGGGATAAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTAT
GAGTACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGAT
GAACCCCGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGT
TCTGTGAGTCACCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGAC
AAGGCTCCATTGCTTCCCTCTGATCCCTACCAGAGAGCTCAAGCTAGGTT
CTGGGTAGATTTCATTGACAGGAAGATGTACGATTCTTTGAGGAAGACAT
GGACCACAAAGGGAGAAGAGCAGGAGGCAGCTAAGAAGGAGTTCTTTGAA
GTTCTGAAGACTTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGG
AGACAATTTTGGGTATGTGGATTTAAGTTTGATCCCATTCTATTGTTGGT
TTTACACGTATGAGACATGTGGAAAGTTCAACGTCGAGGCTGAGTGCCCC
AAGTTCATAGCTTGGGTGAAGAGATGCTTGCAGAGAGAGACTGTTGCCCA
GGCACTTCCTGATGGGAAGAAAGTGTTTGAATTTGTTTCAGCGATGAGGA
CAAATTTAGGATTGGAGTAGAGAGAAAAAGGACA
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