FC930045

Overview
NameFC930045
Unique NameFC930045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15135 contig Ccv1_Contig15135:87..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 363.229 bits (931), Expect = 8.034e-100
Identity = 177/217 (81.57%), Postives = 190/217 (87.56%), Query Frame = 2
Query:   74 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHGF 724
            MGQQSLIYSFVARGTVILAEYTEF GNFTS+A+QCLQKLP++NNKFTYNCDGHTFNYL +NG TYCVV +ESAGRQIP+AFLERVKEDFNKRYGGGKA+TA ANSLNKEFGSKLKEHMQYC DHPEEISKL+KVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGTKM+RK+W +NM                   SVCHGF
Sbjct:    1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGF 217          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 363.229 bits (931), Expect = 8.034e-100
Identity = 180/218 (82.57%), Postives = 191/218 (87.61%), Query Frame = 2
Query:   74 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHGFN 727
            M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVENG TYCVVAV+SAGRQIP+AFLERVKEDFNKRYGGGKAATA ANSLNKEFGSKLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGT+MRRKMW QNM                   S+C GFN
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFN 218          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 5.207e-99
Identity = 178/217 (82.03%), Postives = 191/217 (88.02%), Query Frame = 2
Query:   74 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHGF 724
            M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVE+G TYCVVAV+SAGRQIP++FLERVKEDFNKRYGGGKAATA ANSLNKEFGSKLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR  GT+MRRKMW+QNM                   SVCHGF
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGF 217          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 360.147 bits (923), Expect = 6.801e-99
Identity = 180/223 (80.72%), Postives = 193/223 (86.55%), Query Frame = 2
Query:   59 VRVLR-MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHGF 724
            +RV R MGQQ+LIYSFVARGTVIL EYTEF GNFT++A+QCLQKLP++NNKFTYNCDGHTFNYLVENG TYCVVAVES GRQIP+AFLERVKEDFNKRYGGGKA TA ANSLN+EFGSKLKEHMQYCVDHP+EISKLAKVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGTK+RRKMW +NM                   SVC GF
Sbjct:   60 LRVTRTMGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGF 282          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.289e-81
Identity = 148/219 (67.58%), Postives = 174/219 (79.45%), Query Frame = 2
Query:   74 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNN-KFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHGFN 727
            MGQ+S IYSFVARGT+ILAEYTEFTGNF SIA+QCLQKLP+++N KFTYNCD HTFN+LVE+G  YCVVA +S  +QI IAFLERVK DF KRYGGGKA+TA+A SLNKEFG  +KEHM Y VDH EEI KL KVKAQVSEVK +M+ENI+K +DRGE + +L DKTENLRSQAQ++++QGT++RRK+W QNM                   SVCHGFN
Sbjct:    1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFN 219          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.015e-75
Identity = 145/218 (66.51%), Postives = 164/218 (75.23%), Query Frame = 2
Query:   74 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHGFN 727
            M QQSL YSF+ARGTVIL E+T+F GNFTS+A+Q L+ LP++NNKFTYNCDGHTFN LVENG TYCVVAV+SAGR+IP+AFLERVKEDF KRYGG KAAT  ANSLNKEFGS LKEHMQYC+DHP+EIS LAK KAQVSEVK +MMENIEKVL RG   E+L     +  SQ Q F  + T+M+RK W QNM                   SVC GFN
Sbjct:    1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFN 214          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.251e-68
Identity = 126/211 (59.72%), Postives = 162/211 (76.78%), Query Frame = 2
Query:   74 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAAT-------------------AVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 649
            M Q+ LIYSFVA+GTV+LAE+T ++GNF++IA QCLQKLP  ++K+TY+CDGHTFN+LV+NG  + VVA ES GR +P  FLERVKEDF KRY                          +VA +L++EFG  LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLDRGEKIELLVDKTENL+ QA  F++QG ++RRKMW+Q++
Sbjct:    1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSL 211          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.182e-34
Identity = 78/213 (36.62%), Postives = 129/213 (60.56%), Query Frame = 2
Query:   86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNK-FTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHG 721
            +++Y+ VARGTV+L+E+T  + N ++IA Q L+K+P  N+   +Y+ D + F+    +G T   +A E+AGR+IP AFLE + + F + YG     TA+A ++N+EF   L + + Y  + P    ++ ++K ++++V+GVM+ENI+KVLDRGE++ELLVDKT N++     FR+Q  + R  +W +N                     +CHG
Sbjct:    2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTVLLILLLLVIIYIAVAFLCHG 212          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.439e-34
Identity = 80/214 (37.38%), Postives = 130/214 (60.75%), Query Frame = 2
Query:   86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHG 721
            ++I++ VARGTV+L+E++  + N +SI+ Q L+KLP   +++  +Y+ D + F+    +G T   +A E+AGR IP AFL+ + + F K YG     +A A S+N EF   L + M++  + P    +++++K ++S+V+ VM+ENI+KVLDRGE++ELLVDKTEN++     FR+Q  + R  MW +N+                    VCHG
Sbjct:    2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVLALVVYIAMAFVCHG 213          
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32
Identity = 69/189 (36.51%), Postives = 124/189 (65.61%), Query Frame = 2
Query:   86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQN 646
            +++Y+ VARGTV+LAE++  TGN  ++  + L+KL    ++ +  ++ D + F+ L  +G T+  +A ++ GR++P ++LE +   F K YG   A  A A ++N EF   L + M++   +P  +  L +V+ +VSE++ VM+ENIEK+++RG++IELLVDKT  ++  +  FR+Q  ++RR +W++N
Sbjct:    2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188          
The following BLAST results are available for this feature:
BLAST of FC930045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VA726_ARATH8.034e-10081.57Putative vesicle-associated membrane protein 726 O... [more]
VA722_ARATH8.034e-10082.57Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA721_ARATH5.207e-9982.03Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA725_ARATH6.801e-9980.72Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA724_ARATH1.289e-8167.58Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA723_ARATH4.015e-7566.51Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA727_ARATH1.251e-6859.72Vesicle-associated membrane protein 727 OS=Arabido... [more]
VA711_ARATH1.182e-3436.62Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA713_ARATH3.439e-3437.38Vesicle-associated membrane protein 713 OS=Arabido... [more]
VA714_ARATH3.218e-3236.51Vesicle-associated membrane protein 714 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC34003B11EF PostHarvC1 Citrus clementina cDNA clone C34003B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930045 ID=FC930045; Name=FC930045; organism=Citrus clementina; type=EST; length=735bp
GAACCCAGCCCAGCGCAAATCTCGCATTTCTTTAGTTTCCCTCTCTCCGA
TCCCACGGGTTAGGGTTTTGAGGATGGGCCAACAGTCGTTGATCTATAGC
TTCGTGGCTCGAGGCACGGTGATCCTCGCCGAGTACACTGAGTTCACCGG
TAATTTCACGAGCATCGCATCGCAATGTCTCCAGAAACTTCCCGCTACCA
ATAACAAGTTCACCTACAACTGCGATGGCCACACCTTCAATTACCTCGTT
GAGAACGGCTCCACCTATTGTGTGGTTGCTGTTGAATCTGCTGGCAGGCA
AATTCCAATTGCCTTTCTGGAGCGAGTTAAGGAGGATTTCAACAAGAGAT
ATGGTGGAGGAAAAGCTGCAACGGCTGTTGCAAATAGCCTGAACAAAGAG
TTTGGGTCTAAACTAAAGGAGCACATGCAGTATTGTGTGGATCATCCTGA
AGAGATCAGCAAGCTTGCCAAAGTCAAAGCTCAGGTTTCTGAAGTCAAGG
GGGTTATGATGGAAAATATTGAGAAGGTTCTTGATCGTGGTGAGAAGATT
GAGCTGCTGGTTGACAAAACTGAGAACCTTCGGTCACAGGCACAAGATTT
CCGACAACAGGGGACGAAGATGAGAAGGAAGATGTGGATCCAGAATATGA
AGATTAAATTGATCGTTTTGGGTATCATCATCGCATTGATCCTTATCATC
GTTCTGTCAGTTTGCCATGGCTTCAATGTTGATTT
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