FC930102

Overview
NameFC930102
Unique NameFC930102
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930102_ssr46 microsatellite FC930102_ssr46:46..67. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15102 contig Ccv1_Contig15102:1..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.306e-49
Identity = 95/200 (47.50%), Postives = 136/200 (68.00%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNL 695
            VCVTG +GFI SWL+MRLL+HGY+V  TVR   DP   N K +  L +LP A   L ++ ADL+    FD AI GC+GV HVATP+DFE K+PE  + +  ING L ILK+C K+ TV+++V+TSS   V   +    + DE+ WSDV++ R +   G  Y +SKTL  +AA ++A+E+ +D +T+IP++V+GPF+ P++
Sbjct:    8 VCVTGASGFIGSWLVMRLLEHGYTVRATVR---DPT--NQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSM 202          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.405e-48
Identity = 94/200 (47.00%), Postives = 136/200 (68.00%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNL 695
            VCVTG +GFI SWL+MRLL+HGY+V  TVR   DP   N K +  L +LP A   L ++ ADL+    FD AI GC+GV HVATP+DFE ++PE  + +  ING L ILK+C K+ TV+++V+TSS   V   +    + DE+ WSDV++ R +   G  Y +SKTL  +AA ++A+E+ +D +T+IP++V+GPF+ P++
Sbjct:    8 VCVTGASGFIGSWLVMRLLEHGYTVRATVR---DPT--NQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSM 202          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 5.338e-48
Identity = 100/210 (47.62%), Postives = 135/210 (64.29%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFIC----PNLXALFAP 713
            VCVTG +GFI SWL+MRLL+ GY V  TVR   DP   N K +  L +LP A   L ++ ADLS    +D AI GC GV HVATP+DFE K+PE  + +  +NG LGI+K+C+K+ TV+R V+TSS   V   +   ++ DE  WSD+++I      G  Y +SKTL  +AA +FAEE GLD +++IP++VVGPFI     P+L    +P
Sbjct:    8 VCVTGASGFIGSWLVMRLLERGYFVRATVR---DPG--NLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSP 212          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.106e-48
Identity = 96/200 (48.00%), Postives = 134/200 (67.00%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNL 695
            V VTG +GF+ SWL+M+LL  GY+V  TVR   DP   N      L +LPGA+ERL I+ ADL+    F  AI GCTGV HVATP+DF  K+PE  + +  + G + I+++C ++GTV+R+V+TSS   V   ++   + DE  W+DVD+ R++   G  Y +SKTL  +AAL +A EHGLDLVT+IP++VVGPFI  ++
Sbjct:   13 VLVTGASGFVGSWLVMKLLQAGYTVRATVR---DPA--NVGKTKPLMDLPGATERLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTVNLEERQRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASM 207          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.553e-47
Identity = 93/196 (47.45%), Postives = 133/196 (67.86%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFI 683
            V VTG +GF+ SWL+M+LL  GY+V  TVR   DP   N +    L  LPGA ERL I+ ADLS    F+ AIAGCTGV HVATP+DF+ ++PE  + +  + G L I+++C ++GTVKR+V+TSS  +V   ++     D+  WSD+DY R++   G  Y +SK L  +AA+E+A E+GLD +++IP++VVGPF+
Sbjct:    8 VVVTGASGFVGSWLVMKLLQAGYTVRATVR---DPA--NVEKTKPLLELPGAKERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFL 198          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.902e-47
Identity = 97/200 (48.50%), Postives = 133/200 (66.50%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNL 695
            VCVTG +GFI SWLIMRLL+ GY+V  TVR   DP+  N+K +  L +LP A   L ++ ADL     FDAA+ GCTGV H+ATP+DFE K+PE  + +  ING L ILKSC+K+  ++RVV+TSS   V        + DET WS +D+IR +   G  Y +SK L  +AA ++A E+ L+ +++IP +VVGPFI P++
Sbjct:   25 VCVTGASGFIGSWLIMRLLERGYTVRATVR---DPD--NTKKVQHLLDLPNAKTNLTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVKA-KLRRVVFTSSGGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSM 218          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.315e-46
Identity = 100/211 (47.39%), Postives = 134/211 (63.51%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNLXALFAPHLL 722
            VCVTG  GFI SWL+MRLL+ GY V  TVR+  D      K +  L  LP A   L ++ ADL+    FD AI GC GV HVATP+DFE K+PE  I +  I G L I++SC K+ TVK++VYTSS   V   +  + + DE+ WSD+D+I  +K+ +W   Y +SKTL  +AA+E A+E+ +D V++IP +VVGPFI P     F P L+
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGD-----MKKVKHLLELPKAETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTVNVQETQLPVYDESHWSDLDFIYSKKMTAW--MYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPT----FPPSLI 208          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.239e-45
Identity = 91/189 (48.15%), Postives = 126/189 (66.67%), Query Frame = 3
Query:  129 SWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNL 695
            SWL+MRL++ GY V  TVR   DPE  N K +S L  LPGA  +L I+ ADL     FD AI GCTGV HVATP+DFE K+PE  + +  I G L I+K+CLK+ TV+R++YTSS   +   +    + DE+ WSDV++ R++   G  Y +SKTL  + A +FA+EH +D++T+IP +VVGPF+ P +
Sbjct:    2 SWLVMRLMEPGYMVRATVR---DPE--NLKKVSPLLELPGAKSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFESKDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGTLNVTEDQKPLWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIPTM 185          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.230e-45
Identity = 97/212 (45.75%), Postives = 137/212 (64.62%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR--KLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFIC----PNLXALFAP 713
            VCVTG +GFI SWL+MRLL+   +V  TVR   DP   N K +  L +LP A   L ++ ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  I G LGI+KSC  + TV+R+V+TSS   V   +  + + DE+ WSD+++ R  K+ +W   Y +SKTL  +AA ++A+E+ +D +T+IP++VVGPFI     P+L    +P
Sbjct:    8 VCVTGASGFIGSWLVMRLLERRLTVRATVR---DPT--NVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW--MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSP 212          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45
Identity = 96/209 (45.93%), Postives = 129/209 (61.72%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNLXALFAPHLL 722
            VCVTG  GFI SWL+MRLL+ GY+V  TVR   DPE  N K +  L  LP A   L ++ ADL+    FD AI GC GV HVATP+DFE K+PE  + +  + G L I++SC K+ TVKR+V+TSS   +   ++     D+T WSD+D+I      G  Y  SK L  +AA+E A++  +D +++IP +VVGPFI P     F P L+
Sbjct:   18 VCVTGAAGFIGSWLVMRLLERGYNVHATVR---DPE--NKKKVKHLLELPKADTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPT----FPPSLI 217          
The following BLAST results are available for this feature:
BLAST of FC930102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
DFRA_MALDO6.306e-4947.50Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_PYRCO1.405e-4847.00Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_ARATH5.338e-4847.62Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_MAIZE9.106e-4848.00Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_HORVU1.553e-4747.45Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_DIACA5.902e-4748.50Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_CALCH1.315e-4647.39Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_MEDSA3.239e-4548.15Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
DFRA_VITVI4.230e-4545.75Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_PETHY5.524e-4545.93Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34003G10EF PostHarvC1 Citrus clementina cDNA clone C34003G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930102 ID=FC930102; Name=FC930102; organism=Citrus clementina; type=EST; length=725bp
GAAAAGTGACTGATACAGTTCATATAGAGAAGGAGCTAGACACACAGAGA
GAGAGAGAGAGAGAGAGGAAAAATATGGAAGAGGGTAAAGGAAGAGTCTG
TGTAACAGGTGGTACAGGTTTCATAGCATCTTGGCTGATCATGAGACTTC
TTGACCATGGTTACTCCGTTACAACCACCGTTCGGTCCGAGCTGGACCCA
GAACACAGGAATTCGAAAGACCTTAGCTTCCTGAAAAATCTACCGGGAGC
ATCTGAGAGGCTCCGTATCTTTCATGCCGATCTCAGCCACCCAGATGGCT
TCGATGCAGCTATTGCTGGGTGCACTGGGGTTCTTCATGTTGCCACGCCC
GTTGATTTTGAAGACAAAGAACCTGAGGAAGTTATAACACAAAGAGCAAT
TAATGGAACACTAGGCATCTTAAAATCATGCTTGAAGTCTGGAACGGTGA
AGCGAGTTGTGTACACTTCAAGTAACGCGGCTGTGTTTTACAATGACAAA
GATGTTGATATGATGGATGAGACATTTTGGAGTGATGTTGATTACATCAG
AAAATTGGATTCCTGGGGAAAATCGTACGCAATTTCTAAGACATTAACGG
ANAGGGCAGCTCTTGAGTTTGCAGAAGAACATGGATTAGATCTAGTGACA
CTGATACCTTCTATGGTTGTTGGTCCCTTCATTTGTCCTAATTTGCANGC
TCTGTTCGCTCCTCACTTGCTTTGA
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