FC930142

Overview
NameFC930142
Unique NameFC930142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9723 contig Ccv1_Contig9723:16..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.692e-86
Identity = 148/193 (76.68%), Postives = 162/193 (83.94%), Query Frame = 2
Query:  167 DSNDNELEQLQDGGE----------GFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYXNPAFNTKYGAY 715
            D+ D  +E+ Q  G+          GF  P TNSFG+TFRDY  ESER++GVEEFYR  HI QT DFV++MREEY KLNR EMSIWECCELLNEF+DESDPDLDEPQIEHLLQTAEAIRKDYP+EDWLHLTGLIHDLGKVLLH  FGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDY NP++N+KYG Y
Sbjct:   13 DAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIY 205          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.150e-79
Identity = 136/180 (75.56%), Postives = 154/180 (85.56%), Query Frame = 2
Query:  176 DNELEQLQDGGEGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYXNPAFNTKYGAY 715
            DN  E + DGG  F VP++N+FG  FR+Y  ESER++ VEEFYR  HINQT DFV+RMREEYG++++ EM IWEC ELLNEF+D+SDPDLD PQIEHLLQTAEAIRKD+P+EDWLHLTGLIHDLGKVLLHP FGELPQW+VVGDTFPVGCAFDE  VH KYFKENPDY NP  NTK+GAY
Sbjct:   25 DNAAELVLDGG--FVVPDSNAFGNAFRNYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGDTFPVGCAFDECNVHFKYFKENPDYLNPKLNTKFGAY 202          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.372e-79
Identity = 142/202 (70.30%), Postives = 156/202 (77.23%), Query Frame = 2
Query:  143 WHRMAVLADSNDNELEQLQDGG-----------EGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYXNPAFNTKYGAY 715
            +  ++    S DN  E   DGG           E F  PE N+FG+ FRDY VESERQKGVEEFYR QHINQT DFVK+MR EYGKL+++ MSIWECCELLNE VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKV+  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD+ N  +NTK G Y
Sbjct:   10 FEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDYDVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFVENPDFHNETYNTKNGIY 211          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.530e-74
Identity = 134/193 (69.43%), Postives = 152/193 (78.76%), Query Frame = 2
Query:  167 DSNDNELEQLQDGG---------EGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYXNPAFNTKYGAY 715
            +  DNEL  + DGG         + F  P+ N  G +FRDY   ESERQ+GVEEFYR QHI+QT DFVK+MR+EYGKLN++EMSIWECCELLN  VDESDPDLDEPQI+HLLQTAEAIR+DYP+EDWLHLT LIHDLGKVLL P+FG LPQWAVVGDTFPVGC FD + +HHKYFK N D  NP +NTK G Y
Sbjct:   21 EERDNEL--VLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPVGCTFDSANIHHKYFKGNHDINNPKYNTKNGVY 211          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.232e-73
Identity = 129/182 (70.88%), Postives = 145/182 (79.67%), Query Frame = 2
Query:  173 NDNELEQLQDGGEGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYXNPAFNTKYGAY 715
            +D  + ++    E F  PE N+FG+ FRDY    SERQK VE FY TQH NQT DFV++MR EYGKL+++ M+IWECCEL  E VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKVL  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD+ NP +NTK G Y
Sbjct:   27 SDIPMSKISSDDEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFMENPDFNNPKYNTKAGIY 208          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42
Identity = 84/160 (52.50%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  245 QTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNR-VEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNE--DWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYXNPAFNTKYGAY 715
            + FR+Y    +R   V E YR  H  QT D+    +++Y +L+  ++M +WE  ELLN  +DESDPD + PQI H LQTAEAIRK YP+   DW HLTG IHDLGKVLL   F E PQWA VGDTFP+GC FDES + +++FK NPDY +  +N++ G Y
Sbjct:   30 EEFRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTSIKMGLWEAAELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLGKVLLSKKFKEQPQWATVGDTFPLGCKFDESNIFYEFFKMNPDYNDSKYNSECGIY 186          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX_MOUSE (Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34
Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 2
Query:  224 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYXNPAFNTKYGAY 715
            PE      +FR+Y         V   Y+  H +QT DFV R R +YG  +  +M+I E   +L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK++    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y
Sbjct:   19 PEMAKSKDSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMY 179          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX_RAT (Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33
Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 2
Query:  224 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYXNPAFNTKYGAY 715
            PE      +FR+Y         V   Y+  H +QT DFV R R ++G  +  +M++ E  ++L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK+L    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y
Sbjct:   19 PEMAKSKGSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMY 179          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX_HUMAN (Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 76/165 (46.06%), Postives = 101/165 (61.21%), Query Frame = 2
Query:  224 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYXNPAFNTKYGAY 715
            PE      +FR+Y         V   Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y
Sbjct:   19 PEVAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMY 179          
BLAST of FC930142 vs. ExPASy Swiss-Prot
Match: MIOX_PONAB (Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33
Identity = 76/165 (46.06%), Postives = 101/165 (61.21%), Query Frame = 2
Query:  224 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYXNPAFNTKYGAY 715
            PE      +FR+Y         V   Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y
Sbjct:   19 PEMAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMY 179          
The following BLAST results are available for this feature:
BLAST of FC930142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX1_ARATH3.692e-8676.68Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ1.150e-7975.56Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX4_ARATH4.372e-7970.30Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX2_ARATH5.530e-7469.43Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX5_ARATH1.232e-7370.88Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI1.125e-4252.50Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_MOUSE9.543e-3446.06Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV... [more]
MIOX_RAT1.628e-3345.45Inositol oxygenase OS=Rattus norvegicus GN=Miox PE... [more]
MIOX_HUMAN3.626e-3346.06Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV... [more]
MIOX_PONAB4.736e-3346.06Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34004C03EF PostHarvC1 Citrus clementina cDNA clone C34004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930142 ID=FC930142; Name=FC930142; organism=Citrus clementina; type=EST; length=715bp
AAGAAAAATTTACGTGCTGAGGGCTTGAATCCTCAGAATTCTCAGGGAAG
GACTTTTCCGGCTGCCTATAAATAGATAAATCACTCAACGCCAAGAAAAT
GCAACAACAAGAAGGAGAAGGAGAATCACCAGGCTCTGCAATTGGCACAG
GATGGCTGTTCTCGCTGATTCAAATGACAACGAATTGGAGCAGCTGCAGG
ATGGAGGAGAAGGATTCACGGTGCCTGAGACTAATTCGTTTGGTCAAACT
TTCAGGGATTATGGTGTTGAAAGTGAGCGGCAAAAGGGCGTGGAGGAATT
CTATAGAACTCAACATATTAATCAGACCTGTGACTTTGTGAAAAGGATGA
GAGAAGAGTATGGAAAACTGAATAGGGTGGAAATGAGTATATGGGAATGC
TGTGAGCTACTAAATGAATTTGTTGATGAGAGTGATCCCGACCTTGATGA
GCCTCAAATTGAGCACTTGCTGCAGACAGCCGAGGCCATTAGGAAGGACT
ATCCTAATGAGGATTGGCTACATTTGACCGGTCTCATCCATGATCTTGGA
AAGGTTCTTCTTCATCCTGATTTTGGGGAACTTCCTCAGTGGGCTGTTGT
TGGTGACACATTCCCCGTTGGTTGTGCCTTTGATGAATCAATTGTTCACC
ACAAGTATTTTAAGGAGAATCCAGACTACNACAATCCTGCTTTTAACACC
AAATATGGAGCTTAT
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