FC930151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.558e-74 Identity = 119/142 (83.80%), Postives = 134/142 (94.37%), Query Frame = 2 Query: 137 PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 562 PRP TP+SIP+KLTVNFVLPY SEL+ KEVDMVI+PASTGQMGVLPGHVPTIAELKPG++SVH+G D KKYF+SSGFAF+HANSVADIIAVEAVP+D IDPS VQKGLAEF QKL+SATTDLEKAEAQIGV+VHSA+N+AL+ Sbjct: 61 PRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAINAALS 202 HSP 2 Score: 55.8398 bits (133), Expect = 1.558e-74 Identity = 24/39 (61.54%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 18 SRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYM 134 +RAFS+++P+ +DSTFVE+WKKV PNM+PP+TPS +M Sbjct: 23 TRAFSTELPST--LDSTFVEAWKKVAPNMDPPQTPSAFM 59
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 5.879e-74 Identity = 118/142 (83.10%), Postives = 133/142 (93.66%), Query Frame = 2 Query: 137 PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 562 PRP TP+SIPSKLTVNFVLPY+SEL+ KEVDMVI+PA+TGQMGVLPGHV TIAELKPGV+SVH+GND KYFVS GFAFIHANS ADIIAVEAVP+D+ID +LVQKGLAEF QKL++A+TD+EKAEAQIGVDVHSALN+ALT Sbjct: 58 PRPATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALT 199 HSP 2 Score: 59.3066 bits (142), Expect = 5.879e-74 Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 3 Query: 21 RAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYM 134 R FS+ +PA A DSTFVE+WKK+ PN++PPKTPS YM Sbjct: 19 RPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYM 56
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 3.131e-66 Identity = 111/141 (78.72%), Postives = 127/141 (90.07%), Query Frame = 2 Query: 140 RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 562 RP P++IP+KLTVNFVLPY+S+L+AKEVD VI+PA+TG+MGVLPGHV TIAELKPGVL+V +G DT KYFVSSGF FIHANSVADIIAVEAVP++Q+D LVQKGL EF QKL+SATTDLEK EAQIG+DV SALNSALT Sbjct: 56 RPPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDVDSALNSALT 196 HSP 2 Score: 50.447 bits (119), Expect = 3.131e-66 Identity = 22/44 (50.00%), Postives = 34/44 (77.27%), Query Frame = 3 Query: 3 SAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYM 134 S + +R FS+ V A PA +S+FVE+W+KV+PN++PPKTP ++ Sbjct: 11 SRASATRRFSTDV-ATPATNSSFVEAWRKVSPNIDPPKTPLEFL 53
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.078e-21 Identity = 50/133 (37.59%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 161 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 I KL ++ LP+ + S+++V V +PA +G MG+L HVP+I L+PGV+ V + + ++K+FVS GFA +H N+ I VEA P++ ++ L E N+ + + ++ +K EAQI +V+ AL AL Sbjct: 28 ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQIEAEVYEALQHAL 160
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_KLULA (ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis GN=ATP16 PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.037e-20 Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 173 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 L + F LP+ + S V V +PA +GQ+G+L HVPT+ +L PGV+ V +G+ +KK+FVS GFA + +S I +VEA P++ P V+ LAE + +SSA ++ AEA I ++V AL +AL Sbjct: 31 LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSA-DEVAAAEAAIQLEVLEALQAAL 158
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-20 Identity = 49/126 (38.89%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 173 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 547 LT + + P+ + K+ +V +P + G GV HVP IAELKPGV+ + H+ D +K+F+S GFAF++ ++ I +EAVPIDQ+D V+ GLA + Q + A + KA A IG++ + + Sbjct: 37 LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGLETYQQM 162
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_ASHGO (ATP synthase subunit delta, mitochondrial OS=Ashbya gossypii GN=ATP16 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.146e-19 Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 173 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 L +NF LP+ + + V V +P TGQ+G+L HVP + +L PGV+ V +G+++KK+FVS GFA + +S I +VEA P+D V+ LAE QK + A AEA I ++V AL +AL Sbjct: 30 LKLNFALPHETLFAGTAVKQVNLPVKTGQIGILANHVPIVEQLVPGVVEVLEGSESKKFFVSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAE-AQKNAGAADSRVAAEASIQIEVLEALQAAL 157
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_YEAST (ATP synthase subunit delta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP16 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.955e-19 Identity = 52/131 (39.69%), Postives = 80/131 (61.07%), Query Frame = 2 Query: 167 SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 S L + F LP+ + S EV V +PA +G++GVL HVPT+ +L PGV+ V +G+++KK+F+S GFA + +S + A+EA P++ ++ LAE + +SS+ E AEA I V+V L S L Sbjct: 30 SGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDA-REAAEAAIQVEVLENLQSVL 159
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_BOVIN (ATP synthase subunit delta, mitochondrial OS=Bos taurus GN=ATP5D PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 6.289e-18 Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 146 QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 Q P + P +++ F P ++ V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A EAV +D +D + L + +L A + +AE QI ++ + AL AL Sbjct: 29 QAPAAGPGQMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEALVKAL 167
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_MOUSE (ATP synthase subunit delta, mitochondrial OS=Mus musculus GN=Atp5d PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.073e-17 Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 2 Query: 152 PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 P + P +++ F P + V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A EAV +D +D + L + +LS A + +AE QI ++ + AL AL Sbjct: 31 PAAGPGQMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEALVKAL 167 The following BLAST results are available for this feature:
BLAST of FC930151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930151 ID=FC930151; Name=FC930151; organism=Citrus clementina; type=EST; length=573bpback to top |