FC930157
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +IINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRNITVNEAQSR Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSR 85
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.631e-19 Identity = 45/50 (90.00%), Postives = 50/50 (100.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +IINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQSR Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSR 87
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.631e-19 Identity = 45/50 (90.00%), Postives = 50/50 (100.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +IINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQSR Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSR 87
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19 Identity = 44/50 (88.00%), Postives = 50/50 (100.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +IINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+ITVNEAQSR Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSR 87
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.462e-17 Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +IINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR ITVNEAQSR Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQSR 85
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.164e-17 Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +IINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR ITVNEAQSR Sbjct: 36 KIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSR 85
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16 Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +II DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRNITVNEAQSR Sbjct: 36 KIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15 Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 ++I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRNITVN+AQSR Sbjct: 38 KVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSR 87
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 ++I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRNITVN+AQSR Sbjct: 38 KVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSR 87
BLAST of FC930157 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.134e-15 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 1 Query: 454 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 603 +II DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRNITVNEAQSR Sbjct: 17 KIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQSR 66 The following BLAST results are available for this feature:
BLAST of FC930157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930157 ID=FC930157; Name=FC930157; organism=Citrus clementina; type=EST; length=666bpback to top |