FC930160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.274e-30 Identity = 63/120 (52.50%), Postives = 82/120 (68.33%), Query Frame = 3 Query: 336 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTADES 692 E+ CPFC+EDFD+VGLCCHIDEEHPVEAK+GVCPVC RV +D+V HITTQH N + +L +G +ST +L+KEL+ A+ QSLL DP L SF++N P+ ++S Sbjct: 46 EFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLSSFMFNSPSVNQS 165
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = 3 Query: 336 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTA 683 E+ CPFC+++FD+VGLCCHID HPVEAK+GVCPVC +V +D+V HITTQHGN+ + +L KG +ST +L+KEL+ A+ QS L DP L SF++ P+A Sbjct: 42 EFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQS-LGGSSTFIPSSNIDSDPLLSSFMFKPPSA 157
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 3 Query: 336 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 599 E+ CPFCS+ FD+V LCCHIDE+HP+EAK+GVCPVC RV +DMV HIT QH NI K K +G S ST+S LR+E + +FQSL Sbjct: 43 EFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYSTLSILRREFPDGNFQSL 130
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24 Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 327 GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHK--GNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTADESE 695 G Y CPFC EDFD V CCH+D+EH VEAKSGVCP+C TRV +D++ H+T QHG+ + ++ K S+S +S LRK+L++ QS L DP+L S I ++P A+ S+ Sbjct: 50 GGEAYNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEPSK 175
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24 Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 3 Query: 336 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 599 EY CPFCS+ FD+V LCCHIDE+HP++AK+GVCP+C +V+ DM+ HIT QH N+ K K +G + S +S L++E + +FQSL Sbjct: 43 EYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSMLSILKREFPDGNFQSL 130
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 3 Query: 336 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL 602 E+ CPFC+E +D++GLCCHID+EH +E+K+ VCPVC +V +D+V HIT HG++ K K K +NST+S LRKEL+ Q LL Sbjct: 34 EFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKRKSRKSGTNSTLSLLRKELREGDLQRLL 122
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI195_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana GN=DI19-5 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 336 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLSFIYNMPTADESE 695 +YPCPFCS+D+DLV LC HIDEEH ++A +G+CPVC RV M MVDHITTQH ++ +L+K S S S ++ + QSL+ DP LSFIYN P+ +S+ Sbjct: 42 DYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITTQHRDVFK-----RLYKDESYSAFSPGTRK----YLQSLIDEPLSTNHTSKSVLDPLLSFIYNPPSPKKSK 152
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 3 Query: 336 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLA----RXXXXXXXXXXXXDPWL-SFIYNMPTADESE 695 E+ CP+C ED D+V LC H++EEHP E + CP+C ++ DM++HIT QHG + + +L+ + +S L ++L+ AH Q LL R DP L SF + PT+D E Sbjct: 41 EFACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEE 165
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI192_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana GN=DI19-2 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 53/158 (33.54%), Postives = 76/158 (48.10%), Query Frame = 3 Query: 222 STSSSRNYQSTLKSQFAXXXXXXXXXXXXXXXXVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLSFIYNMPTADESE 695 S+ SSR+Y+S +++ + EYPCPFC+ D+DLV LC HIDEEH EA +G+CPVC RV M MVDHIT+ H ++ S K ++ + L + H L D +LSFI N ++++ Sbjct: 10 SSGSSRSYRSETAAKYQSGPYQDLEEFEEVDDDIA--VEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHHRDVLKSEQKEMSYRED-----PYLSDKYLQPHLDELPPSMNHHQHPSKHVSDQFLSFINNSALPNQTK 160
BLAST of FC930160 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 3 Query: 345 CPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL 602 CP+C ED D+ LC H++E+HP E + CP+C ++T DM++HIT QHG + S +++ + +S L ++L++A Q+LL Sbjct: 64 CPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSGRRMRRFDIPESQALSLLSRDLRDAQLQALL 149 The following BLAST results are available for this feature:
BLAST of FC930160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930160 ID=FC930160; Name=FC930160; organism=Citrus clementina; type=EST; length=709bpback to top |