FC930164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE3_HUMAN (Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens GN=MAPRE3 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.212e-30 Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP-VERRCKGGKERSSRGSQKISKSLQ--------------TNNMHNAGSGD-------IGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L W+N+ L L+ ++IE+ SGA CQ +DM +PG V + KV F AK E++ I N+KVLQ F K+ ++K I V KLVKG+ DN EF+QW K++ D+ G ++YNP + R+ + + G Q +KS + NM +G + P A+ G + ++ L++++ DLKL+VD LE+ERDFY Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFY 226
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE3_RAT (Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus GN=Mapre3 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.582e-30 Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP-VERRCKGGKERSSRGSQKISKSLQ--------------TNNMHNAGSGD-------IGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L W+N+ L L+ ++IE+ SGA CQ +DM +PG V + KV F AK E++ I N+KVLQ F K+ ++K I V KLVKG+ DN EF+QW K++ D+ G ++YNP + R+ + + G Q +KS + NM +G + P A+ G + ++ L++++ DLKL+VD LE+ERDFY Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKERDFY 226
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE3_MOUSE (Microtubule-associated protein RP/EB family member 3 OS=Mus musculus GN=Mapre3 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.582e-30 Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP-VERRCKGGKERSSRGSQKISKSLQ--------------TNNMHNAGSGD-------IGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L W+N+ L L+ ++IE+ SGA CQ +DM +PG V + KV F AK E++ I N+KVLQ F K+ ++K I V KLVKG+ DN EF+QW K++ D+ G ++YNP + R+ + + G Q +KS + NM +G + P A+ G + ++ L++++ DLKL+VD LE+ERDFY Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKERDFY 226
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE1_PONAB (Microtubule-associated protein RP/EB family member 1 OS=Pongo abelii GN=MAPRE1 PE=2 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 3.525e-30 Identity = 77/211 (36.49%), Postives = 116/211 (54.98%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR------------------CKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G ++Y+PV R K SS Q+ + +T AG G + P N E L +++ LKL+V+ LE+ERDFY Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAARQGQETAVAPSLVAPALNKPKKPLSSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGV-----GNGDDEAAELMQQVNVLKLTVEDLEKERDFY 217
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE1_HUMAN (Microtubule-associated protein RP/EB family member 1 OS=Homo sapiens GN=MAPRE1 PE=1 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 77/211 (36.49%), Postives = 116/211 (54.98%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR------------------CKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G ++Y+PV R K SS Q+ + +T AG G + P N E L +++ LKL+V+ LE+ERDFY Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGV-----GNGDDEAAELMQQVNVLKLTVEDLEKERDFY 217
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE1_BOVIN (Microtubule-associated protein RP/EB family member 1 OS=Bos taurus GN=MAPRE1 PE=2 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 77/211 (36.49%), Postives = 115/211 (54.50%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR------------------CKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R K SS Q+ + +T AG G + P N E L +++ LKL+V+ LE+ERDFY Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAARQGQETAMAPSLVAPALNKPKKPLSSSSAAPQRPITTHRTTATPKAGPGVVRKNPGV-----GNGDDEAAELMQQVNVLKLTVEDLEKERDFY 217
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE1_RAT (Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus GN=Mapre1 PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30 Identity = 77/213 (36.15%), Postives = 117/213 (54.93%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKERS--------------------SRGSQKISKSLQTNNMHNAGSGDIGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R G+E + S Q+ + +T AG G + P N E L +++ LKL+V+ LE+ERDFY Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR--QGQETAVAPSLVAPALSKPKKPLGSGSAAPQRPIATQRTTAAPKAGPGMVRKNPGM-----GNGDDEAAELMQQVKVLKLTVEDLEKERDFY 217
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE1_MOUSE (Microtubule-associated protein RP/EB family member 1 OS=Mus musculus GN=Mapre1 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.340e-29 Identity = 77/213 (36.15%), Postives = 117/213 (54.93%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKE--------------------RSSRGSQKISKSLQTNNMHNAGSGDIGHKPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R G+E S+ Q+ + +T AG G + P N E L +++ LKL+V+ LE+ERDFY Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR--QGQETAVAPSLVAPALSKPKKPLGSSTAAPQRPIATQRTTAAPKAGPGMVRKNPGV-----GNGDDEAAELMQQVKVLKLTVEDLEKERDFY 217
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE1_COTJA (Microtubule-associated protein RP/EB family member 1 OS=Coturnix coturnix japonica GN=MAPRE1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29 Identity = 79/210 (37.62%), Postives = 119/210 (56.67%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKERSSRGSQKISKSLQTNNMHN----AGSGDIG-HKPRQAK------------IYGANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L WIN LQL L++IE+ SGA CQ +DM +PG V + KV F AK E++ IQN+KVLQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R +G + ++ +L M+ G+G G +P A+ + A E L ++I LKL+V+ LE+ERDFY Sbjct: 15 LSRHDMLAWINESLQLTLTKIEQLCSGAAYCQFMDMLFPGSVALKKVKFQAKLEHEYIQNFKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR---------QGQETVAPNLVAPVMNKPKKPLGTGSAGPQRPIVAQRTPATPKGGTGMVKKAAGDDESAGLIEQINVLKLTVEDLEKERDFY 212
BLAST of FC930164 vs. ExPASy Swiss-Prot
Match: MARE1_XENTR (Microtubule-associated protein RP/EB family member 1 OS=Xenopus tropicalis GN=mapre1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29 Identity = 78/211 (36.97%), Postives = 119/211 (56.40%), Query Frame = 2 Query: 110 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKERSSRGSQKISKSLQTNNMHNAGSGD-------------IGHKPRQAKIYG-----ANSAQEVQALSKEITDLKLSVDLLEEERDFY 688 + R+++L WIN LQL+L++IE+ SG+V CQ +DM +PG V + KV F AK E++ IQN+KVLQ F K+ ++K I V+KLVKG+ DN EF+QW K++ D+ G ++Y+PV R + + S ++ + GSG+ + +KP I N E L ++I LK++V+ LE+ERDFY Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGSVYCQFMDMLFPGSVVLKKVKFQAKLEHEYIQNFKVLQAGFKKMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAAR----QGQESAPVPVLAAPVLNKPKKPLGSGNTAPQRTVPVQRTAVSNKPPAQGISKKPATVGNGDDESAELIQQINVLKITVEDLEKERDFY 218 The following BLAST results are available for this feature:
BLAST of FC930164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930164 ID=FC930164; Name=FC930164; organism=Citrus clementina; type=EST; length=689bpback to top |