FC930173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 2.613e-43 Identity = 94/150 (62.67%), Postives = 112/150 (74.67%), Query Frame = 3 Query: 186 MLDGGEYSPA---AEPYSCMNEIXXXXXXXXXXXXXXXRFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCG 626 M +GGEYSPA AEP+ M ++ RFSDEQI+SLE+MFE+ETRLEPRKK+QLA+ELGLQPRQVAIWFQNKRARWKSKQLE +YNIL+ N++NLAS+FE+LKKEKQALV +LQ+ E Q K + E ERQC G Sbjct: 1 MTEGGEYSPAMMSAEPFLTMKKMKKSNHNKNNQR----RFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEE-----ERQCSG 141
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.136e-38 Identity = 77/112 (68.75%), Postives = 98/112 (87.50%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCG 626 RFS+EQI+SLEL+FE+ETRLEPRKK+Q+A+ELGLQPRQVAIWFQNKRARWK+KQLE++YN L+AN+NNLAS+FE +KKEKQ+LV +LQ+ NE +Q +P+ E +CCG Sbjct: 33 RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQ-RPKEE----KHHECCG 139
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.030e-31 Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSME 653 RFS+EQI+SLE MF +T+LEPR+KLQLA+ELGLQPRQVAIWFQNKRARWKSKQLER+Y+ L+ +++ L +E+LKKEK AL+ QL+K E+LQ + + + G V G+ E Sbjct: 33 RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEPRGKYGDNAGDDARSGGVAGMKKEE 153
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.030e-31 Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSME 653 RFS+EQI+SLE MF +T+LEPR+KLQLA+ELGLQPRQVAIWFQNKRARWKSKQLER+Y+ L+ +++ L +E+LKKEK AL+ QL+K E+LQ + + + G V G+ E Sbjct: 33 RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEPRGKYGDNAGDDARSGGVAGMKKEE 153
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.010e-27 Identity = 61/101 (60.40%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFE-NETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRR 590 RF++EQIRSLE MF + +LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQLE DY L++ ++ L SR E+LK+EK AL +QL + E L+ + R Sbjct: 76 RFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREER 176
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.010e-27 Identity = 61/101 (60.40%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFE-NETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRR 590 RF++EQIRSLE MF + +LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQLE DY L++ ++ L SR E+LK+EK AL +QL + E L+ + R Sbjct: 76 RFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREER 176
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25 Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFE-NETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 RF++EQ+RSLE F +LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQ+E DY L+A ++ L +R E+L++EK AL Q+ +EL R+DQS S Sbjct: 68 RFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQV---DELRGKLNERQDQSGS 171
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.335e-25 Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFE-NETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 RF++EQ+RSLE F +LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQ+E DY L+A ++ L +R E+L++EK AL Q+ +EL R+DQS S Sbjct: 67 RFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQV---DELRGKLNERQDQSGS 170
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.547e-24 Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSME 653 R + EQ+ LE FE E +LEP +K QLAK+LGLQPRQVA+WFQN+RARWK+KQLERDY++L++ ++ L S ++++ + L ++ E LQ K ++ P GQV N ++ Sbjct: 71 RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEPP------GQVPEPNQLD 185
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23 Identity = 53/106 (50.00%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 R S EQ+R+LE FE E +LEP +K +LA++LGLQPRQVA+WFQN+RARWK+KQLERDY L+ +++ L + +AL+++K AL+ ++++ L+ K ED + S Sbjct: 46 RLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKE----LKGKLGDEDAAAS 147 The following BLAST results are available for this feature:
BLAST of FC930173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930173 ID=FC930173; Name=FC930173; organism=Citrus clementina; type=EST; length=669bpback to top |