FC930174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_ARATH (Preprotein translocase subunit secY, chloroplastic OS=Arabidopsis thaliana GN=SECY PE=1 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 1.702e-67 Identity = 137/207 (66.18%), Postives = 156/207 (75.36%), Query Frame = 2 Query: 77 STSRIKTSPRLRNSICRASFSVQRQPTNAISTSTS---KFSSCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFGDXXXXXXXXXXXXXXXYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 S+SR+++S + S S +R A S + S E SVFDPLGINPD S L+S WESF+SLLSP+FES+SG +R+K SS RGVAAA+EDSSIDFGD +LALSRLGIYIPLGGVNREAFVGNLDQNS+LSTLD+FSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+ GEAGRKK Sbjct: 27 SSSRLRSSSLYKGSFFSVSTKTRRNTCKAKSWNLGLVINSRSSEASVFDPLGINPDETSGLSSIWESFVSLLSPSFESSSGNRRDKPSSGRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSILSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKK 233
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_SPIOL (Preprotein translocase subunit secY, chloroplastic OS=Spinacia oleracea GN=SECY PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.349e-64 Identity = 127/194 (65.46%), Postives = 151/194 (77.84%), Query Frame = 2 Query: 122 CRASFSVQRQPTN-----AISTSTSKFSSCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFGDXXXXXXXXXXXXXXXYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 C+A+F ++ +PT+ ++S+ST+ SSC SVFDPLGI D + S W+ L +S TFES+SGT++++SSSARGVAAA+EDSSIDFGD LALSRLGIY+PLGGVNREAFVGNLDQNS +STLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL+Q+ PKLQDLQK+ GEAGRKK Sbjct: 37 CKATFGLRTKPTSWIAAASLSSSTTTTSSCGSSVFDPLGIEQDNSWGVASAWDGVLKFVSQTFESSSGTRKDRSSSARGVAAAIEDSSIDFGDFFKGPLPGKFLTLLGLLALSRLGIYVPLGGVNREAFVGNLDQNSFISTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLSQVYPKLQDLQKKEGEAGRKK 230
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_PEA (Preprotein translocase subunit secY, chloroplastic OS=Pisum sativum GN=SECY PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.764e-56 Identity = 125/223 (56.05%), Postives = 156/223 (69.96%), Query Frame = 2 Query: 23 MVISVREISSSWPLCFNPSTSRIKTSPRLRNSICRASFSVQRQPTNAISTSTSK-FSSCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFGDXXXXXXXXXXXXXXXYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 M+I+VR+ S + C + + I T L + R+SF S+S+S ++SC+ + FDPLGINPD+ S +STW + L++ F+++S + RGVAAA+EDSSIDFGD +LALSRLG+YIPLGGVNR+AF+GNLDQNSLL+TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+ GEAGRKK Sbjct: 1 MLITVRDPSPTLR-CSSLNRRLIPTKHNLSPRLLRSSFRQHNLSLRLRSSSSSNLYTSCDLANFDPLGINPDLSS--SSTWRNLLTI----FQTSS-----QKDKPRGVAAAIEDSSIDFGDFFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKK 211
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_ORYSJ (Preprotein translocase subunit secY, chloroplastic OS=Oryza sativa subsp. japonica GN=SECY PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.020e-52 Identity = 122/219 (55.71%), Postives = 144/219 (65.75%), Query Frame = 2 Query: 38 REISSSWPLCFNPSTSRIKTSPRLRNSICRASFSVQRQPTNAISTSTSKFSSCEGSVFDPLGINPDVCSH--LNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFGDXXXXXXXXXXXXXXXYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 R SS+ P+ P++ R R R + ++ + +R+ ++ S G FDPLG+ D S S +F +LSP F S+SG ++EKS RG AAA+EDSSID GD YLALSRLGIYIPLGGVNR+AF GNLDQNSLL TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+ GEAGRKK Sbjct: 25 RAPSSASPVSGAPASLRF----RGRRAASASASAARRRRGASLPCSPRCALETAGPGFDPLGLYNDGPSRNDTQSPLSNFFGVLSPVFGSSSGGRKEKSYG-RGAAAAIEDSSIDIGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLLGTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKK 238
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_MAIZE (Preprotein translocase subunit secY, chloroplastic OS=Zea mays GN=SECY PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50 Identity = 108/166 (65.06%), Postives = 124/166 (74.70%), Query Frame = 2 Query: 200 GSVFDPLGINPDVCSHLN-STWESFLSLLSPTFESTSG--TKREKSSSARGVAAAMEDSSIDFGDXXXXXXXXXXXXXXXYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 G FDPLG+ + + L+ S +F +++P F S+SG REK+S RG AAA+EDSSID GD +LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQ++ GEAGRKK Sbjct: 71 GPGFDPLGLYEEGSNSLSRSPLSTFFGIMAPVFGSSSGGGASREKASG-RGAAAAIEDSSIDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKK 235
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_PORYE (Preprotein translocase subunit secY OS=Porphyra yezoensis GN=secY PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19 Identity = 44/85 (51.76%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 L L+RLGI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI +LGIVP+IN+ IV QLL +I P L+ LQK GE GR+K Sbjct: 18 LVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQK 102
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_PORPU (Preprotein translocase subunit secY OS=Porphyra purpurea GN=secY PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19 Identity = 44/85 (51.76%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 L L+RLGI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI +LGIVP+IN+ IV QLL +I P L+ LQK GE GR+K Sbjct: 18 LVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQK 102
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_SYNP6 (Preprotein translocase subunit secY OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 L L RLGI+IP+ G++R AF +L N+ ++ LD FSGGG+ LG+ +LGI+P+INA I+ QLL P L+DLQK GEAGR+K Sbjct: 35 LILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIGFLDIFSGGGLSALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRK 123
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_SYNE7 (Preprotein translocase subunit secY OS=Synechococcus elongatus (strain PCC 7942) GN=secY PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 L L RLGI+IP+ G++R AF +L N+ ++ LD FSGGG+ LG+ +LGI+P+INA I+ QLL P L+DLQK GEAGR+K Sbjct: 35 LILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIGFLDIFSGGGLSALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRK 123
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_SYNY3 (Preprotein translocase subunit secY OS=Synechocystis sp. (strain PCC 6803) GN=secY PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 42/85 (49.41%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 L L R+GI+IP+ ++R+AF ++ NS++ L+ F+GGG+ +GI +LGI+P+INA I+ QLL P L+DLQK GEAGR+K Sbjct: 35 LILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNIFTGGGLSTVGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRK 119 The following BLAST results are available for this feature:
BLAST of FC930174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930174 ID=FC930174; Name=FC930174; organism=Citrus clementina; type=EST; length=706bpback to top |