FC930177

Overview
NameFC930177
Unique NameFC930177
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 6.784e-30
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  241 GIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            G + G++P++NLKGY+LGNP TD   + NS   +A+   LIS E+YES KR CQG YV VDP+N  C+  +E+  +C+SR+N   I    C
Sbjct:  196 GNEHGYKPQINLKGYILGNPSTDLDSDHNSKIPYAHRMGLISDELYESLKRTCQGNYVKVDPTNTKCLKLMEDYGKCVSRINEGLILIALC 286          

HSP 2 Score: 59.3066 bits (142), Expect = 6.784e-30
Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL+ +P F++NP+Y+GGDSY+GI+VP IVQ IS GN
Sbjct:  161 KWLVENPQFVSNPIYVGGDSYAGIVVPAIVQQISIGN 197          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.301e-29
Identity = 40/91 (43.96%), Postives = 61/91 (67.03%), Query Frame = 1
Query:  241 GIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            G  +  +P++NL+G++LGNP TD+  + NS   FA+  ALIS E YES KR+CQG Y++V+P N  C+  LE+  +C+S ++   I +P C
Sbjct:  197 GNHLDSKPQINLQGFVLGNPATDTDIDLNSRIPFAHGKALISDEHYESLKRSCQGNYISVNPRNTKCLKLLEDFKKCVSGISEEYILKPDC 287          

HSP 2 Score: 62.7734 bits (151), Expect = 7.301e-29
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 2
Query:   11 PVNLYMNRNIFQWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN*LNN 166
            PVN ++++    WL  HP FL+NPLY+ G+SYSGI++P IVQ IS+GN L++
Sbjct:  155 PVNEFLHK----WLDKHPEFLSNPLYVAGNSYSGIVIPTIVQEISNGNHLDS 202          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.937e-26
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
Query:  259 RPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            +P +NL+GY+LGNP+TDS  + NS   +A+  ALIS E+YES KR C+GEY +VDP N  C+  LE   EC S++  + I  P C
Sbjct:  206 KPPINLQGYMLGNPITDSKIDGNSQIPYAHGMALISDELYESLKRICKGEYEHVDPYNTECLKLLEEFNECTSKLYRSHILYPLC 290          

HSP 2 Score: 52.7582 bits (125), Expect = 6.937e-26
Identity = 23/37 (62.16%), Postives = 26/37 (70.27%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL  H  F +NP Y+GGDSYSGI VP  VQ IS GN
Sbjct:  165 KWLGKHQEFSSNPFYVGGDSYSGITVPATVQEISKGN 201          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.591e-25
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  262 PRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            P +NL+GY+LGNPLTD T   NS   FA+  ALIS E+YES K+ C+GEY NV P N  C+  +E   +C +R+    I +P C
Sbjct:  207 PPINLQGYVLGNPLTDYTTGSNSRIPFAHGMALISDELYESLKKTCKGEYTNVHPRNTQCLKFVEEFNKCTNRIFQQLILDPLC 290          

HSP 2 Score: 50.447 bits (119), Expect = 2.591e-25
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL  H  F +NP Y+ GDSYSG++VP  VQ IS GN
Sbjct:  165 KWLGKHQVFSSNPFYVAGDSYSGLVVPATVQEISKGN 201          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.711e-25
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  262 PRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            P +NL+GY+LGNPLTD   + NS   FA+  ALIS E+YES K+ C+GEY NV P N  C+  +E   +C +R+    I +P C
Sbjct:  207 PPINLQGYVLGNPLTDYAIDSNSRIPFAHGMALISDELYESLKKTCKGEYTNVHPRNTQCLKFIEEFNKCTNRILQQLILDPLC 290          

HSP 2 Score: 51.2174 bits (121), Expect = 5.711e-25
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL  H  F +NP Y+ GDSYSG++VP  VQ IS GN
Sbjct:  165 KWLGKHQEFSSNPFYVAGDSYSGLVVPATVQEISKGN 201          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.426e-25
Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  241 GIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSCRGPFI-SPRRKLFNWNRSIIEEDSLDFLSSPTQPAASGTWCRFHNYVYSYIW 666
            G + G  P +N++GY+LGNP+TD     N    FA+   LIS E++ES +R+C G++ NVDPSN  C  +L+    C+S +    I   +C+  ++ +    +    R +++E S++  SS   P+     C  + Y  S  W
Sbjct:  194 GNEKGLTPLINIQGYVLGNPVTDKNIETNYRVPFAHGMGLISDELFESLERSCGGKFFNVDPSNARCSNNLQAYDHCMSEIYSEHILLRNCKVDYVLADTPNIRTDRRRVMKEFSVNDSSSLPPPS-----CFTYRYFLSAFW 331          

HSP 2 Score: 55.4546 bits (132), Expect = 7.426e-25
Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 2
Query:   47 WLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            W + HP F++NP Y+GGDSYSG IVP  VQ IS GN
Sbjct:  160 WFVKHPEFISNPFYVGGDSYSGKIVPGAVQQISLGN 195          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.259e-24
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  268 MNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            +NL+GY+LGNP+T +   +N    F++  +LIS E+YES KRNC+G Y NVDP N  C+  +E   +C  ++N   I  P C
Sbjct:  200 INLQGYVLGNPITYAEHEKNYRIPFSHGMSLISDELYESLKRNCKGNYENVDPRNTKCVRLVEEYHKCTDKINTQHILIPDC 281          

HSP 2 Score: 56.225 bits (134), Expect = 1.259e-24
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL  HP F +NP Y+ GDSYSG+IVP +VQ IS GN
Sbjct:  156 KWLSKHPQFFSNPFYVTGDSYSGMIVPALVQEISKGN 192          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.259e-24
Identity = 47/137 (34.31%), Postives = 69/137 (50.36%), Query Frame = 1
Query:  259 RPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSCRGP----FISPRRKLFNWNRSIIEEDSLDFLSSPTQPAASGTW--CRFHNYV 651
            +P +NL+GY+LGNP+T    +QN    F++  ALIS E+YES +R+C+G Y NVDP N  C+  +E   +C   +N   I  P C       F+ P   L  W       D+L         ++ G W  C + N +
Sbjct:  198 KPPINLQGYILGNPITYFEVDQNYRIPFSHGMALISDELYESIRRDCKGNYFNVDPRNTKCLKLVEEYHKCTDELNEFNILSPDCDTTSPDCFLYPYYLLGYWINDESVRDALH-----VNKSSIGKWERCTYQNRI 329          

HSP 2 Score: 54.6842 bits (130), Expect = 1.259e-24
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL  HP F +NP Y  GDSYSG+IVP +VQ IS GN
Sbjct:  157 KWLSKHPQFSSNPFYASGDSYSGMIVPALVQEISKGN 193          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.259e-24
Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 1
Query:  262 PRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            P +NL+GY+LGNP+T     QN    +AY   LIS EIYE  KR C G Y NVDPSN  C+   E   +C +++N   I  P C
Sbjct:  196 PPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDC 279          

HSP 2 Score: 56.6102 bits (135), Expect = 1.259e-24
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL  HP + +NPLY+ GDSYSG+IVP +VQ IS GN
Sbjct:  154 KWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN 190          
BLAST of FC930177 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.114e-24
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  262 PRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLENITECISRVNHAQIYEPSC 513
            P +NL+GY+LGNPLTD   + NS   FA+  ALIS E++ES K+ C+G+Y NV P N  C+  +E   +C + +   +I +P C
Sbjct:  207 PPINLQGYVLGNPLTDFVYDYNSRIPFAHGMALISDELFESLKKTCKGDYRNVHPRNTECLKFIEEFNKCTNSICQRRIIDPFC 290          

HSP 2 Score: 53.1434 bits (126), Expect = 6.114e-24
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 2
Query:   44 QWLIAHPSFLANPLYIGGDSYSGIIVPMIVQHISDGN 154
            +WL  H  F +NP Y+GGDSYSG++VP  VQ IS GN
Sbjct:  165 KWLGKHQEFSSNPFYVGGDSYSGMVVPATVQEISKGN 201          
The following BLAST results are available for this feature:
BLAST of FC930177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SCP18_ARATH6.784e-3047.25Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP17_ARATH7.301e-2943.96Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP6_ARATH6.937e-2649.41Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]
SCP1_ARATH2.591e-2548.81Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP2_ARATH5.711e-2547.62Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
SCP19_ARATH7.426e-2532.17Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCP10_ARATH1.259e-2443.90Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
SCP12_ARATH1.259e-2434.31Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP8_ARATH1.259e-2446.43Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP3_ARATH6.114e-2444.05Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC34004F02EF PostHarvC1 Citrus clementina cDNA clone C34004F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930177 ID=FC930177; Name=FC930177; organism=Citrus clementina; type=EST; length=668bp
CTTTTTTTTTCCCGTCAATTTGTATATGAATCGTAATATCTTTCAGTGGC
TTATAGCTCATCCCAGCTTCCTCGCAAATCCACTCTACATTGGTGGTGAT
TCTTACTCAGGAATAATTGTTCCAATGATCGTTCAGCATATATCTGACGG
TAATTAACTCAATAACTATATATGAGCTAAAGGCCTCTATTAAGCAAACA
TTTATTATGATCGTTGGGGAAAAATTGTTGATTTATTGCAGGTATTGATG
TCGGACACCGGCCAAGAATGAATCTCAAAGGATATTTGCTTGGGAACCCT
CTAACAGATTCCACTGAAAATCAAAACTCAGTGCCACACTTTGCTTACCT
GAATGCACTTATCAGCCATGAAATCTACGAGTCAGCCAAAAGAAATTGCC
AGGGCGAGTATGTGAATGTAGATCCAAGCAATGGCTTATGTATAGCCGAT
CTTGAAAATATTACGGAGTGCATTAGCAGAGTAAACCACGCGCAGATATA
TGAACCTTCTTGTAGAGGTCCGTTTATATCCCCTAGACGCAAGCTTTTCA
ACTGGAATCGCAGCATCATCGAAGAAGATTCTTTAGATTTTCTCTCTTCG
CCAACTCAACCGGCAGCTTCAGGAACTTGGTGTCGGTTCCACAACTATGT
CTACTCATACATTTGGGC
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