FC930182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 372.474 bits (955), Expect = 1.334e-102 Identity = 172/241 (71.37%), Postives = 205/241 (85.06%), Query Frame = 3 Query: 6 RRIGYWSNYSGLSVVAPEILYTKPPNSSS-NRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGRW 722 R +GYWSN+SGLSVV PE LY++PPN+S+ N+ L +I+PGE+T PRGWVFPNNG PLRI VPNRVSY ++V+KDK+PPGV+GYCIDVFEAA+ LLPYPVP YI+YG+GKRNP Y+++V +V + FD AVGDITIVTNRT+ VDFTQP++ESGLVVVAPV++ KSSPW+FLKPFTI MW VTGGFFLFVGA+VWILEHRFN EFRGPP +QL+TIFWFSFST FSH LGR+ Sbjct: 436 RTVGYWSNHSGLSVVHPETLYSRPPNTSTANQRLKGIIYPGEVTKPPRGWVFPNNGKPLRIGVPNRVSYTDYVSKDKNPPGVRGYCIDVFEAAIELLPYPVPRTYILYGDGKRNPSYDNLVNEVVADNFDVAVGDITIVTNRTRYVDFTQPFIESGLVVVAPVKEAKSSPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEFRGPPRRQLITIFWFSFSTMFFSHRENTVSSLGRF 676
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 351.288 bits (900), Expect = 3.184e-96 Identity = 158/240 (65.83%), Postives = 195/240 (81.25%), Query Frame = 3 Query: 9 RIGYWSNYSGLSVVAPEILYTKPPNSSS-NRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGRW 722 R+GYWSN++G SV PE LY+KP N+S+ ++ L +IWPGE+ PRGWVFP NG PL+I VPNRVSY + +KDK+P GVKG+CID+FEAA+ LLPYPVP YI+YG+GK+NP Y++++ +VA N FD AVGD+TI+TNRTK VDFTQP++ESGLVVVAPV+ KSSPW+FLKPFTI MW VTG FLFVGAV+WILEHRFN EFRGPP +Q++T+FWFSFST FSH LGR+ Sbjct: 430 RVGYWSNHTGFSVAPPETLYSKPSNTSAKDQRLNEIIWPGEVIKPPRGWVFPENGKPLKIGVPNRVSYKNYASKDKNPLGVKGFCIDIFEAAIQLLPYPVPRTYILYGDGKKNPSYDNLISEVAANIFDVAVGDVTIITNRTKFVDFTQPFIESGLVVVAPVKGAKSSPWSFLKPFTIEMWAVTGALFLFVGAVIWILEHRFNEEFRGPPRRQIITVFWFSFSTMFFSHRENTVSTLGRF 669
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 318.931 bits (816), Expect = 1.751e-86 Identity = 151/240 (62.92%), Postives = 183/240 (76.25%), Query Frame = 3 Query: 6 RRIGYWSNYSGLSVVAPEILYTKPPN-SSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGR 719 R+IGYWSN+SGLS++ PE LY K N SSSN+HL +V WPG + TPRGWVFPNNG LRI VP+R S+ EFV++ V+GY IDVFEAAV L+ YPVPH ++++G+G +NP +N+ V V + FDA VGDI IVT RT++VDFTQPY+ESGLVVVAPV KL +PWAFL+PFT PMW VT FFL VG+V+WILEHR N+EFRGPP +Q+VTI WFSFST FSH LGR Sbjct: 410 RQIGYWSNHSGLSIIPPESLYKKLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFVSRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPNFNEFVNNVTIGVFDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAPVTKLNDTPWAFLRPFTPPMWAVTAAFFLIVGSVIWILEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRENTVSTLGR 649
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 317.775 bits (813), Expect = 3.901e-86 Identity = 152/241 (63.07%), Postives = 185/241 (76.76%), Query Frame = 3 Query: 9 RIGYWSNYSGLSVVAPEILYTKPPN-SSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAK-DKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALN-KFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGR 719 +IGYWSNYSGLS+V PE Y+KPPN SSSN+HL SV WPG + TPRGW+F NNG LRI VP+R S+ +FV++ + S V+GYCIDVFEAAV LL YPVPH +I +G+G NP YN++V +V FDA VGDI IVT RT++VDFTQPY+ESGLVVVAPV +L +PWAFL+PFT+PMW VT FF+ VGA +WILEHR N+EFRGPP +Q++TI WF+FST FSH LGR Sbjct: 409 QIGYWSNYSGLSIVPPESFYSKPPNRSSSNQHLNSVTWPGGTSVTPRGWIFRNNGRRLRIGVPDRASFKDFVSRVNGSSNKVQGYCIDVFEAAVKLLSYPVPHEFIFFGDGLTNPNYNELVNKVTTGVDFDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAPVTRLNENPWAFLRPFTLPMWAVTASFFVIVGAAIWILEHRINDEFRGPPRRQIITILWFTFSTMFFSHRETTVSTLGR 649
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 6.885e-83 Identity = 140/241 (58.09%), Postives = 182/241 (75.52%), Query Frame = 3 Query: 6 RRIGYWSNYSGLSVVAPEILYTKPPNSS-SNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGRW 722 R +GYWSNYSGLSV++PE LY KP N + + L+ VIWPGE PRGWVFPNNG ++I VP+RVSY +FV+ D V+G CIDVF AA+NLL YPVP+ ++ +GN + NP Y++++ ++ + FDA VGD+TI+TNRTK+VDFTQPY+ SGLVV+ V++ S WAFL+PFTI MW VTG FFL +G VVW+LEHR N+EFRGPP++QL+T+FWFSFST F+H LGR+ Sbjct: 411 RTVGYWSNYSGLSVISPETLYKKPANRTRETQKLHDVIWPGETINKPRGWVFPNNGNEIKIGVPDRVSYRQFVSVDSETGMVRGLCIDVFVAAINLLAYPVPYRFVPFGNNRENPSYSELINKIITDDFDAVVGDVTIITNRTKVVDFTQPYVSSGLVVLTSVKRQNSGGWAFLQPFTIKMWTVTGLFFLIIGTVVWMLEHRINDEFRGPPAKQLITVFWFSFSTLFFAHREDTRSTLGRF 651
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.778e-81 Identity = 151/241 (62.66%), Postives = 173/241 (71.78%), Query Frame = 3 Query: 6 RRIGYWSNYSGLSVVAPEILYTKP-PNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGV-KGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGR 719 R+IGYWSN+SGLS V PE+LYTK PN S++ L VIWPGE PRGWVF NNG L+I VP RVSY EFV++ + + KG+CIDVF AAVNLLPY VP +I YGNGK NP Y +V+ + FD VGD+ IVTNRTK+VDFTQPY SGLVVVAP +KL S WAFL+PF MW VTG FLFVG VVWILEHR N+EFRGPP +Q VTI WFSFST F+H LGR Sbjct: 408 RQIGYWSNHSGLSTVLPELLYTKEKPNMSTSPKLKHVIWPGETFTKPRGWVFSNNGKELKIGVPLRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENPSYTHMVEMITTGNFDGVVGDVAIVTNRTKIVDFTQPYAASGLVVVAPFKKLNSGAWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVTILWFSFSTMFFAHRENTVSTLGR 648
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.489e-69 Identity = 131/237 (55.27%), Postives = 164/237 (69.20%), Query Frame = 3 Query: 12 IGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGR 719 IGYW N+SGLSV+ + + S S + L+SV+WPG PRGWVF NNG LRI VPNR + E V+ KS + G+C+DVF AA+NLLPY VP + +GNG NP +++V+ + +DA VGDITI+T RTK+ DFTQPY+ESGLVVVAPV+KL SS AFL+PFT MWL+ FL VGAV+W LEH+ N+EFRGPP +Q++T FWFSFST FSH LGR Sbjct: 406 IGYWFNHSGLSVMPADEMEN---TSFSGQKLHSVVWPGHSIKIPRGWVFSNNGRHLRIGVPNRYRFEEVVSV-KSNGMITGFCVDVFIAAINLLPYAVPFELVAFGNGHDNPSNSELVRLITTGVYDAGVGDITIITERTKMADFTQPYVESGLVVVAPVRKLGSSAMAFLRPFTPQMWLIAAASFLIVGAVIWCLEHKHNDEFRGPPRRQVITTFWFSFSTLFFSHRETTTSNLGR 638
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.726e-55 Identity = 108/226 (47.79%), Postives = 147/226 (65.04%), Query Frame = 3 Query: 12 IGYWSNYSGLSVVAPEILYTKPPNSS-SNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDK-SPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTCF 683 +G+WS G SVVAP+ +++ S S+ L + WPG PRGWV ++ PL+I VP RVS+ EFV ++K S ++G+CIDVF A+ +PY VP+ + +GNG +P YN ++Q V +DAAVGDI IV +R+KLVDF+QPY +GLVVV P ++ W FL+PFT +W V FL + V+WILEHR N +FRGPP +QL T+ FSFST F Sbjct: 403 VGFWSKNGGFSVVAPKTRHSQKKTSFVSDEKLGDITWPGGGREKPRGWVIADSADPLKIVVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPNYNHLIQMVTDGVYDAAVGDIAIVPSRSKLVDFSQPYASTGLVVVIPAND-DNATWIFLRPFTSRLWCVVLVSFLVIAVVIWILEHRINEDFRGPPRRQLSTMLLFSFSTLF 627
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR22_ARATH (Glutamate receptor 2.2 OS=Arabidopsis thaliana GN=GLR2.2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.022e-50 Identity = 100/231 (43.29%), Postives = 142/231 (61.47%), Query Frame = 3 Query: 6 RRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP----PGVKGYCIDVFEAAVNLLPYPVPHNYIMYG--NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQ-KLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFST 677 R IG+W+ +GL + + S+ HL +IWPGE + P+GW P NG LRI VP R+ + + V + P VKG+CID FEA + +PY V + + + NG+ +ND+V QV L +FDA VGD TI+ NR+ VDFT P+M+SG+ ++ P++ ++K ++FLKP +I +WL T FF VG VW LEHR N++FRGP + Q TIFWF+FST Sbjct: 397 RSIGFWTEGNGLVKKLDQEPRSIGTLSTWPDHLKHIIWPGEAVSVPKGWEIPTNGKKLRIGVPKRIGFTDLVKVTRDPITNSTVVKGFCIDFFEAVIQAMPYDVSYEFFPFEKPNGEPAGNHNDLVHQVYLGQFDAVVGDTTILANRSSFVDFTLPFMKSGVGLIVPLKDEVKRDKFSFLKPLSIELWLTTLVFFFLVGISVWTLEHRVNSDFRGPANYQASTIFWFAFST 627
BLAST of FC930182 vs. ExPASy Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3) HSP 1 Score: 189.504 bits (480), Expect = 1.602e-47 Identity = 102/246 (41.46%), Postives = 145/246 (58.94%), Query Frame = 3 Query: 6 RRIGYWSNYSGLSVVAPEILYTKPPNSSS--NRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPG----VKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTC-FSHTGRHCEFLGRW 722 R IG W +G I+ K N++S L VIWPG+ P+GW P NG LR+ +P + + EFV P GYCI++FEA + LPY V YI + + N Y+++V QV +DA VGD+TIV NR+ VDFT PY ESG+ ++ P++ K++ W FL+P+++ +W+ T FF+F+G +VWILEHR N +FRGPP Q+ T FWF+FST F+H + L R+ Sbjct: 410 RIIGLWRPSNG-------IVNAKSKNTTSVLGERLGPVIWPGKSKDVPKGWQIPTNGKMLRVGIPVKKGFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKKLPYSVIPKYIAFLSPDEN--YDEMVYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESGVSMMVPLKDNKNT-WVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWFAFSTMNFAHREKVVSNLARF 645 The following BLAST results are available for this feature:
BLAST of FC930182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930182 ID=FC930182; Name=FC930182; organism=Citrus clementina; type=EST; length=737bpback to top |