FC930185

Overview
NameFC930185
Unique NameFC930185
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930185 vs. ExPASy Swiss-Prot
Match: YQK1_SCHPO (UPF0676 protein C1494.01 OS=Schizosaccharomyces pombe GN=SPCC1494.01 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.886e-11
Identity = 53/175 (30.29%), Postives = 75/175 (42.86%), Query Frame = 3 
Query:  129 CIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVL--RNEKHRGYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIXXXXXXXXXFFDKPEMLGQAIATLRLLHY 647
            CIDLS  D    V  L  AC + GF  + NHGI  + ++  F  + +FF +P+ EK K L      H GYT    E LD + Q RGD KE Y +    P+   E+  PF   ++           +   +FQR   ++   +             FF K     + +  LRLL Y
Sbjct:    8 CIDLSENDTSIVVKELLDACKNWGFVSLKNHGIPLDEIDRTFKLADKFFDIPVEEKQKYLFKGGRLHSGYTGHFGEKLDMEHQSRGDLKESYDL-AGFPDPKLENLCPFIAEHM-----------DEFLQFQRHCYKLTLRLLDFFAIGFGIPPDFFSKSHSSEEDV--LRLLKY 168
The following BLAST results are available for this feature:
BLAST of FC930185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YQK1_SCHPO3.886e-1130.29UPF0676 protein C1494.01 OS=Schizosaccharomyces po... [more]
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Properties
Property NameValue
Genbank descriptionC34004F10EF PostHarvC1 Citrus clementina cDNA clone C34004F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930185 ID=FC930185; Name=FC930185; organism=Citrus clementina; type=EST; length=711bp
CTCATCGTTAAGTCTCTTTGTTGCCTTGTTTTTGCTTTGCCCCTGGAAAA
AACACGCTCCAAAAGAACAGAAAAATGGAAAATTATGGGCGGAGCAAAAA
TGGCGCGGAAGCGCAAACAGTCCTCAATTGCATCGATCTCTCGAGCCCAG
ACATTCAACAATCCGTTTCTCTTTTGAAACAGGCATGCTTAGACTGTGGC
TTCTTCTATGTAGTAAACCATGGGATAAGTCAAGAATTCATGGAGGAGGT
TTTTAGTCAGAGCAAGAGGTTTTTTAAGATGCCGTTAAATGAGAAAATGA
AGGTTTTAAGGAACGAAAAGCACAGAGGTTACACTCCTGTTCTTGATGAG
CTTCTTGATCCTGATACTCAAGTTCGCGGAGATTACAAGGAGGGTTATTA
TATAGGCGTTGAAGTACCTGAAGGTGACCCTGAATCTGAGAAGCCATTTT
ATGGCCCAAATGTTTGGCCTGCACCGGACTGTTTGCCTGGTTGGAGGGAG
ACAATGGAGAGGTTTCAGCGAGAAGCATTAGAGGTGGCAAAAGCAGTTGC
GAGAATAATAGCGCTCGCACTTGATTTGGATGCTGATTTCTTTGACAAGC
CAGAAATGCTTGGCCAAGCTATTGCAACATTGCGGCTACTACACTACGAA
GGTCAAATTTCTGATCCTTCAAGGGAATGTACGGTGCTGGGGCGCATTCG
ACTATGGTTGA
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