FC930192

Overview
NameFC930192
Unique NameFC930192
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:4..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_MALDO (Aldehyde dehydrogenase family 7 member A1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 323.553 bits (828), Expect = 6.892e-88
Identity = 147/191 (76.96%), Postives = 172/191 (90.05%), Query Frame = 3
Query:  144 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            M FAK+E+EFLS IGL+PE PG F+NGKWKA GP +S+++P+NNQ+IA V E S+E+YEEG+++C++A+K W  LPAPKRGE+VRQIGDALREKL HLG+L+S+EMGKIL EGIGEVQEVI MCDFAVGLSRQLNGS+IPSERP+HMM E WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCVVWK  P
Sbjct:    1 MGFAKKEHEFLSAIGLAPENPGGFINGKWKASGPVISTVSPSNNQEIAKVTEVSMEEYEEGLRSCNDAAKTWKSLPAPKRGEIVRQIGDALREKLQHLGKLVSLEMGKILAEGIGEVQEVIYMCDFAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7B4_ARATH (Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3)

HSP 1 Score: 323.168 bits (827), Expect = 9.001e-88
Identity = 154/191 (80.63%), Postives = 170/191 (89.01%), Query Frame = 3
Query:  144 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            M  A  EYEFLSEIGL+    G +V GKW+A+GP VS++NPANNQ IA VVEASLEDYE+G+KAC EA+KIWM++ APKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCVVWK  P
Sbjct:    1 MGSANNEYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQGLKACEEAAKIWMQVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_BRANA (Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3)

HSP 1 Score: 311.612 bits (797), Expect = 2.710e-84
Identity = 154/194 (79.38%), Postives = 168/194 (86.60%), Query Frame = 3
Query:  144 MEFAKQEYEFLSEIGLSPE-TPGCFVNGKWKAHGPTVSSINPANNQ--KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            M  A +EYEFLSEIGLS     G +V GKW  +GP VS++NPANNQ   IA VVEASLEDYE G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCVVWK  P
Sbjct:    1 MGSASKEYEFLSEIGLSSSHNLGNYVGGKWLGNGPLVSTLNPANNQVLPIAQVVEASLEDYEIGLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 194          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_PEA (Aldehyde dehydrogenase family 7 member A1 OS=Pisum sativum PE=1 SV=3)

HSP 1 Score: 288.5 bits (737), Expect = 2.457e-77
Identity = 135/182 (74.18%), Postives = 156/182 (85.71%), Query Frame = 3
Query:  171 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            FL EIGL     G F+NG+WKA+GPTV S+NP+ NQ IA+V EA+L+DYEEG++A SEA+K W  +PAPKRGE+VRQIGDALR KL  LGRL+++EMGKIL EGIGEVQE+IDMCD++VGLSRQLNGS+IPSERP HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV GN VVWK  P
Sbjct:   10 FLKEIGLGATNIGSFINGQWKANGPTVHSVNPSTNQVIASVTEATLDDYEEGLRASSEAAKTWRTVPAPKRGEIVRQIGDALRAKLDPLGRLVALEMGKILAEGIGEVQEIIDMCDYSVGLSRQLNGSIIPSERPEHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVGGNTVVWKGAP 191          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_BOVIN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Bos taurus GN=ALDH7A1 PE=2 SV=3)

HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61
Identity = 107/185 (57.84%), Postives = 139/185 (75.14%), Query Frame = 3
Query:  162 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            +Y +L E+GL  E  G + NG W   G  +++  PANN+ IA V +AS+ DYEE ++   EA  IW ++PAPKRGEVVRQIGDALREK+  LG L+S+EMGKIL EG+GEVQE +D+CD+AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN  IA++CGN  +WK  P
Sbjct:   10 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAREAWSIWADVPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDYAVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACLWKGAP 193          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_HUMAN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=4)

HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61
Identity = 107/185 (57.84%), Postives = 139/185 (75.14%), Query Frame = 3
Query:  162 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            +Y +L E+GL  E  G + NG W   G  +++  PANN+ IA V +AS+ DYEE +K   EA KIW ++PAPKRGE+VRQIGDALREK+  LG L+S+EMGKIL EG+GEVQE +D+CD+AVGLSR + G ++PSER  H ++E WNP+G+VG+ITAFNFP AV GWN  IA++CGN  +WK  P
Sbjct:   10 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAP 193          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_CAEEL (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.769e-59
Identity = 108/185 (58.38%), Postives = 133/185 (71.89%), Query Frame = 3
Query:  162 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            +Y FL E+GL+    G F +GKW A G  V S  PANN  IA V   +++DYE  +    +A   W E+PAP+RGE+VRQIGD LR +L +LG+L+S+EMGKI  EG+GEVQE +D+CD+A GLSR L G + PSERP H +LE WNPLGVVGVI+AFNFPCAV GWN  +ALV GN VVWK  P
Sbjct:   28 KYGFLKELGLTENNAGVF-HGKWAASGQVVQSFAPANNSPIANVQNGNVQDYEIAISEAKKAYNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDICDYATGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVISAFNFPCAVYGWNNALALVTGNSVVWKPAP 211          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_MOUSE (Alpha-aminoadipic semialdehyde dehydrogenase OS=Mus musculus GN=Aldh7a1 PE=2 SV=3)

HSP 1 Score: 225.713 bits (574), Expect = 1.956e-58
Identity = 104/185 (56.22%), Postives = 136/185 (73.51%), Query Frame = 3
Query:  162 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKVPP 716
            +Y +L ++GL  +  G + NG W   G  +++  PANN+ IA V +ASL+DYEE +    +A  IW ++PAPKRGE+VR+IGDA REK+  LGRL+S+EMGKIL EGIGEVQE +D+CD+A GLSR + G  +PSERP H ++E WNPLG+VG+ITAFNFP AV GWN  IAL+ GN  +WK  P
Sbjct:   10 QYAWLQDLGLREDNEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASLKDYEETIGKAKKAWNIWADIPAPKRGEIVRKIGDAFREKIQLLGRLVSLEMGKILVEGIGEVQEYVDVCDYAAGLSRMIGGPTLPSERPGHALIEMWNPLGLVGIITAFNFPVAVFGWNNAIALITGNVCLWKGAP 193          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: AL7A1_DICDI (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum GN=DDB_G0276821 PE=3 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.956e-58
Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 3
Query:  162 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            EY FL+E+G+  E      NGKW   G  +  +NP NN+ IATV  A+ E+YE  ++A   A   W   PAP+RGE+VR IG A+REK+  L +L+S+EMGKI  E  GEVQE ID+CD+A GLSR +NG V+PSERPNH+++ETWNPLG+VG+ITAFNFPCAVLGWNA I+++CGN  +WK
Sbjct:    6 EYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNNKVIATVRGAAPEEYETCIQAMLAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCDYATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQLWK 187          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  213 FVNGKW--KAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            F+NG+W     G  V   NPA+ N  +  V  ++ ED E  + A +EA   W +L   +RG+ + +  D + ++L  +    + EMGK LPE  GE    I +  +  G   +  G VIPS   + +M  T  PLGVVGVI+ +NFP A+  W    ALV GN VV K
Sbjct:   13 FINGEWVKSQSGDMVKVENPADVNDIVGYVQNSTAEDVERAVTAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGKTLPEAKGETARGIAILRYYAGEGMRKTGDVIPSTDKDALMFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVIK 180          
The following BLAST results are available for this feature:
BLAST of FC930192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
AL7A1_MALDO6.892e-8876.96Aldehyde dehydrogenase family 7 member A1 OS=Malus... [more]
AL7B4_ARATH9.001e-8880.63Aldehyde dehydrogenase family 7 member B4 OS=Arabi... [more]
AL7A1_BRANA2.710e-8479.38Aldehyde dehydrogenase family 7 member A1 OS=Brass... [more]
AL7A1_PEA2.457e-7774.18Aldehyde dehydrogenase family 7 member A1 OS=Pisum... [more]
AL7A1_BOVIN7.181e-6157.84Alpha-aminoadipic semialdehyde dehydrogenase OS=Bo... [more]
AL7A1_HUMAN9.379e-6157.84Alpha-aminoadipic semialdehyde dehydrogenase OS=Ho... [more]
AL7A1_CAEEL1.769e-5958.38Putative aldehyde dehydrogenase family 7 member A1... [more]
AL7A1_MOUSE1.956e-5856.22Alpha-aminoadipic semialdehyde dehydrogenase OS=Mu... [more]
AL7A1_DICDI1.956e-5857.14Putative aldehyde dehydrogenase family 7 member A1... [more]
ALDH1_BACSU3.852e-2236.90Probable aldehyde dehydrogenase ycbD OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionC34004G05EF PostHarvC1 Citrus clementina cDNA clone C34004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930192 ID=FC930192; Name=FC930192; organism=Citrus clementina; type=EST; length=727bp
GGCTCTCTTTGATCTTCTTATTCAACAAGTAACCAAAACCTCTAATTCAT
TCCAACACACTTTCATGTGACATTGTCTTACATAACTAATCTTTTTTCAA
TCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAAAGATGGAAT
TTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGATCGGCTTAAGTCCAGAA
ACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGGCACATGGTCCTACTGT
CTCCTCTATCAATCCTGCTAACAATCAGAAAATTGCTACTGTTGTGGAGG
CTTCACTTGAGGATTATGAGGAAGGCATGAAAGCTTGCAGCGAAGCATCT
AAGATATGGATGGAACTTCCAGCTCCTAAGAGAGGGGAGGTTGTTAGACA
AATAGGTGATGCATTGAGAGAAAAACTGCATCATCTCGGCCGTCTTCTTT
CAATTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAAGTCCAAGAA
GTTATTGACATGTGTGATTTTGCTGTGGGTTTAAGCCGGCAACTTAATGG
ATCAGTAATACCTTCAGAACGTCCCAATCATATGATGTTAGAGACATGGA
ATCCTCTTGGGGTAGTTGGTGTCATTACAGCATTTAACTTCCCGTGTGCT
GTTCTTGGATGGAATGCATGCATTGCACTAGTCTGCGGCAACTGTGTTGT
TTGGAAAGTGCCCCCACACTCCTTTGA
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