FC930195

Overview
NameFC930195
Unique NameFC930195
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15117 contig Ccv1_Contig15117:1..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930195 vs. ExPASy Swiss-Prot
Match: PHM8_YEAST (Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae GN=PHM8 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.210e-14
Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 2
Query:  128 FDLDDTLYPSETGIAEAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP-YDLIKPDPQLRNLLCSITQRKI-------IFTNSDRNHAITCLKRLEIANCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDDN 649
            FD+D+TLY   T +   +++++  F   + GF + +A  L    ++ YG ++ GL           Y+ F+   LP  D +KPD +LR LL ++ ++K+       +FTNS +NHAI C+K L IA+ FD I              RP E   + KP     + A   + +    +A F+DDN
Sbjct:   57 FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCVKILGIADLFDGI--------TYCHYDRPIEEEFICKPDPKFFETAKLQSGLSSFANAWFIDDN 231          
BLAST of FC930195 vs. ExPASy Swiss-Prot
Match: SSM1_YEAST (Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 2
Query:  128 FDLDDTLYPSETGIAEAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQR-KI----IFTNSDRNHAITCLKRLEIANCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDDNIK 655
            FD+D+ LY S T I + ++++I  F       S   A  L    +K YG  + GL  + + + A +Y+  V   LP  D++KPD  LRN+L  + Q  KI    +FTN+ +NHAI CL+ L IA+ FD +             +R D   ++ KP + A + A+  + +    +A F+DD+ K
Sbjct:   60 FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL--------TYCDYSRTD--TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGK 231          
The following BLAST results are available for this feature:
BLAST of FC930195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PHM8_YEAST7.210e-1430.60Phosphate metabolism protein 8 OS=Saccharomyces ce... [more]
SSM1_YEAST1.360e-1232.24Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 P... [more]
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Properties
Property NameValue
Genbank descriptionC34004G08EF PostHarvC1 Citrus clementina cDNA clone C34004G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930195 ID=FC930195; Name=FC930195; organism=Citrus clementina; type=EST; length=658bp
GAGAGGCCCCTTCCTCGCCTGCTGTTTGCTGGATATTAATTAAATTTGCT
TCCTCGTTATAATCATTAATTTACTTCATTTCTTCGGTTCAAGCGAAGCC
ATGGATTCTCCCTTCAACTGCCTCGTTTTTGATTTGGATGACACTTTGTA
CCCTTCAGAAACTGGAATAGCTGAAGCTGTCAAGAGAAATATTGAAGGAT
TTCTTATTGAGAAATGCGGATTCTCAGAAACCAAAGCTTCAAGTCTCAGA
GTTGAGCTTTTCAAAGCTTACGGCAGCACCCTCGCTGGCTTGCGAGCTCT
AGGCTATGATATTGGTGCCGATGATTACCACGGTTTCGTGCACGGAAGAT
TGCCGTATGATTTGATCAAACCAGATCCTCAACTACGCAACCTCTTATGC
AGCATCACCCAGAGAAAGATTATTTTCACCAATTCGGACAGGAACCATGC
AATTACATGTCTGAAACGACTAGAAATAGCAAATTGTTTCGATCAAATAA
TCTGTTTCGAGACAATGAACCCGAATCTCTCGAAAGCAACTCGTCCCGAT
GAATTCCCCGTCCTTTTGAAGCCTTCAATGGACGCCATGAAACTCGCCCT
CCATGTTGCTAATGTTGATCCTCGTCACGCCTTGTTTCTTGACGACAACA
TTAAAATG
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