FC930196

Overview
NameFC930196
Unique NameFC930196
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10237 contig Ccv1_Contig10237:9..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPR2_ARATH (12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2)

HSP 1 Score: 332.028 bits (850), Expect = 2.044e-90
Identity = 155/188 (82.45%), Postives = 170/188 (90.43%), Query Frame = 3
Query:  135 IPLLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQ 698
            +PLLTPY MG  NLSHRVVLAPLTRQ+SY +VPQPHAILYYSQRT+ GG LIAEATGVSDTAQGYPDTPG WTKE VEAWKPIVDAVHAKGGIFFCQIWHVGRVSN+ +QP  QAPIS T KP+ PQ+RANG+D A+FTPPRRL  +EIP IVNDFRLAARNA+EAGFDG+E+HGAHGYLIDQFMKD+
Sbjct:   12 VPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGFQPRRQAPISCTGKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGVEIHGAHGYLIDQFMKDK 199          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPR1_ARATH (12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2)

HSP 1 Score: 330.102 bits (845), Expect = 7.769e-90
Identity = 155/187 (82.89%), Postives = 167/187 (89.30%), Query Frame = 3
Query:  135 IPLLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKD 695
            +PLLTPY MG  NLSHRVVLAPLTRQRSY NVPQPHA +YYSQRTT GG LI EATGVSDTAQGY DTPG WTKE VEAWKPIVDAVHAKGGIFFCQIWHVGRVSN  +QPNG+APIS +DKPL PQIR+NG+D A FTPPRRL  +EIP IVNDFRLAARNA+EAGFDG+E+HGA+GYLIDQFMKD
Sbjct:   10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCSDKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKD 196          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPR1_SOLLC (12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1 PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.791e-86
Identity = 149/188 (79.26%), Postives = 166/188 (88.30%), Query Frame = 3
Query:  135 IPLLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQ 698
            IPL++P  MG   L HRVVLAPLTRQRSY  +PQPHAIL+YSQR+T GGLLI EAT +S+T  GY D PG WTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN+D+QPNG+ PIS TD+ LTPQIR+NG+DIA FT PRRL TDEIPQIVN+FR+AARNAIEAGFDG+E+HGAHGYLIDQFMKDQ
Sbjct:   14 IPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIRSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQ 201          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPRL2_ARATH (Putative 12-oxophytodienoate reductase-like protein 2 OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.422e-77
Identity = 138/188 (73.40%), Postives = 159/188 (84.57%), Query Frame = 3
Query:  135 IPLLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQ 698
            IPLL PY MG  NLSHRVVLAPLTR RSY N+PQP+A LYY+QRTT GGLLI+E+  VS+T+ GYPD PG W ++QVEAWKPIVDAVH+KGGIFFCQIWH GRV +QD QPNG+AP+SSTDKPL  +    G    QF PPRRLR+DE+P IVNDFR+AARNAIEAGFDG+E+HGAHGYLIDQF+KD+
Sbjct:    7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPVSSTDKPLMCKNMYGG----QFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQFLKDK 189          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPRL1_ARATH (Putative 12-oxophytodienoate reductase-like protein 1 OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.966e-73
Identity = 126/179 (70.39%), Postives = 146/179 (81.56%), Query Frame = 3
Query:  159 MGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKD 695
            M + NL+HR+V+AP+ R RSY N+PQPH  LYY QRTT GGLLI+EATGVS+TA  Y + PG W KEQ+EAWKPIVDAVH+ GGIFFCQ+WH GRVS+QD QPNG++P+SSTDKP             +FTPPRRLRTDEIP I+NDFRLAARNA EAGFDG+E+HGAHGYLIDQFMKD
Sbjct:    1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNMPGIWRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFADD------PSNEFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKD 173          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPR3_SOLLC (12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.094e-59
Identity = 112/188 (59.57%), Postives = 135/188 (71.81%), Query Frame = 3
Query:  138 PLLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQ--FTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKD 695
            PL +PY MG  NLSHRVVLAP+TR R+ NN+PQ     YY QR T GG LI E T +S T+ G+P  PG +TKEQV  WK IVD VHAKG + FCQ+WHVGR S++ YQP G APISST+KP++ + R    D     +  PR + T EI Q+V D+R +A NAIEAGFDGIE+HGAHGYLIDQF+KD
Sbjct:   11 PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKD 198          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPR3_ARATH (12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.479e-56
Identity = 107/189 (56.61%), Postives = 136/189 (71.96%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQ----IRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKD 695
            L + Y MG  +LSHRVVLAP+TR R+ N VP      YY+QRTT GG LI+E T VS  + G+P  PG ++ EQVEAWK +V+AVHAKGG  FCQ+WHVGR S+  YQPNG +PISST+KP++      +  +G  + ++  PR L   EIP++V D+ L+A NAI AGFDGIE+HGAHGYLIDQF+KD
Sbjct:   12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHV-KYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKD 199          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OPRL_SOLLC (12-oxophytodienoate reductase-like protein OS=Solanum lycopersicum GN=OPR2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.302e-48
Identity = 101/189 (53.44%), Postives = 126/189 (66.67%), Query Frame = 3
Query:  135 IPLLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAH-GYLIDQFMKDQ 698
            +PL TPY +G   L+HR+V   LTR RS NN PQ H   YYSQR T GGL+I+EA   SD ++  P+ PG W +EQVEAWKP+V+ VH KGG+FFCQIWH GR+S     P   A   S    +    R +    A+ T P  L +D+IP IVNDFR+AARNAI+AGFDGIE++ +  GYLID+FM DQ
Sbjct:    9 VPLCTPYKLGRFKLTHRIVFPALTRNRSQNNTPQSHLTEYYSQRATNGGLIISEAAAASDISKECPNLPGIWNEEQVEAWKPVVNGVHEKGGVFFCQIWHSGRLS----VPTVSALFFSIG--IGWSTRPDDKVYAKPT-PLPLESDKIPCIVNDFRIAARNAIKAGFDGIEINASSGGYLIDEFMNDQ 190          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: NEMA_ECOLI (N-ethylmaleimide reductase OS=Escherichia coli (strain K12) GN=nemA PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.473e-37
Identity = 86/189 (45.50%), Postives = 116/189 (61.38%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPI--SSTDKPLTPQIR-ANGVDI-AQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L +P  +G++  ++R+ +APLTR RS    ++P P    YY QR +  GL+I+EAT +S  A+GY   PG  + EQ+ AWK I   VHA+ G    Q+WH GR+S+   QP GQAP+  S+        +R  NG  I  + + PR L  +EIP IVNDFR A  NA EAGFD +ELH AHGYL+ QF+
Sbjct:    6 LYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRAS-AGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLLHQFL 193          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OYE1_SACPS (NADPH dehydrogenase 1 OS=Saccharomyces pastorianus GN=OYE1 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.143e-24
Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYN--NVP-QPHAILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L  P  +G+  L HR V+ PLTR R+ +  N+P +  A+ YY+QR  + G ++I E   +S  A GY + PG W++EQ+  W  I +A+H K    + Q+W +G  +  D          S    +               P   L  DEI Q + ++  AA+N+I AG DG+E+H A+GYL++QF+
Sbjct:   17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFL 203          
The following BLAST results are available for this feature:
BLAST of FC930196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
OPR2_ARATH2.044e-9082.4512-oxophytodienoate reductase 2 OS=Arabidopsis tha... [more]
OPR1_ARATH7.769e-9082.8912-oxophytodienoate reductase 1 OS=Arabidopsis tha... [more]
OPR1_SOLLC1.791e-8679.2612-oxophytodienoate reductase 1 OS=Solanum lycoper... [more]
OPRL2_ARATH4.422e-7773.40Putative 12-oxophytodienoate reductase-like protei... [more]
OPRL1_ARATH2.966e-7370.39Putative 12-oxophytodienoate reductase-like protei... [more]
OPR3_SOLLC1.094e-5959.5712-oxophytodienoate reductase 3 OS=Solanum lycoper... [more]
OPR3_ARATH1.479e-5656.6112-oxophytodienoate reductase 3 OS=Arabidopsis tha... [more]
OPRL_SOLLC3.302e-4853.4412-oxophytodienoate reductase-like protein OS=Sola... [more]
NEMA_ECOLI4.473e-3745.50N-ethylmaleimide reductase OS=Escherichia coli (st... [more]
OYE1_SACPS1.143e-2433.69NADPH dehydrogenase 1 OS=Saccharomyces pastorianus... [more]

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Properties
Property NameValue
Genbank descriptionC34004G09EF PostHarvC1 Citrus clementina cDNA clone C34004G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930196 ID=FC930196; Name=FC930196; organism=Citrus clementina; type=EST; length=746bp
GAATCATTTTATTTTCAGACGCGTTAAGGATTCTCAATTTGCTTGTAATT
CTACTAAACATGGGAAACAGAGCAGAGGAGGCTAAGCAAAATCAAGAAGA
GAACAACGGTAACATGGCCATTGAAACTCCCATCATCCCTCTTCTCACTC
CTTACAATATGGGCAGTCTCAATCTTTCTCATAGAGTTGTTTTGGCACCA
CTGACTAGACAGAGATCATACAACAATGTTCCTCAGCCACATGCCATTTT
GTATTACTCTCAAAGAACCACCAAAGGGGGTTTGCTTATAGCCGAAGCCA
CTGGAGTTTCCGACACTGCTCAAGGGTATCCAGATACACCTGGTACCTGG
ACAAAGGAGCAAGTTGAAGCATGGAAACCGATTGTAGATGCTGTTCATGC
CAAAGGTGGGATCTTCTTTTGTCAGATTTGGCACGTTGGCAGGGTTTCAA
ATCAAGATTATCAGCCAAATGGTCAAGCTCCAATTTCCAGTACAGACAAG
CCATTGACCCCTCAAATCCGCGCTAATGGTGTTGATATTGCACAATTCAC
TCCTCCAAGGCGGCTAAGGACAGATGAAATCCCTCAAATTGTGAATGATT
TCAGGCTTGCTGCAAGAAACGCAATTGAGGCTGGTTTCGATGGCATTGAG
CTCCACGGTGCACATGGCTACCTAATTGACCAATTTATGAAGGATCAGTG
AATGATCGAACAGACAGTATGGAGATCCTAGAGAATCGTGCGTTTG
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