FC930199

Overview
NameFC930199
Unique NameFC930199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15114 contig Ccv1_Contig15114:12..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 4.282e-99
Identity = 185/191 (96.86%), Postives = 185/191 (96.86%), Query Frame = 1
Query:   82 MAAMTSTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            MAAM STAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIV REMTRRYMTDMITYADTDVV VGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP HIFLDELGIDYDEQDNYVVIKHAALFTSTIMS LLARPNV LFNA
Sbjct:    1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNA 191          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.198e-70
Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 1
Query:  148 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIV REMTRRYM DMITYADTDVV VGAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWLGGQLFS MVVRKP H+FLDELGI+YDEQDNYVVIKHAALFTSTIMS LLARPNV LFNA
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNA 187          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.708e-68
Identity = 136/192 (70.83%), Postives = 158/192 (82.29%), Query Frame = 1
Query:   82 MAAMTSTAFAPSVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            MAA+ ST    S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIV REMTRRYMTDMITYA+TDVV VGAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWLGGQLFSAM+VRKP H+FLDE+G+ YDEQD YVV+KHAALFTSTIMS LLARPNV LFNA
Sbjct:    1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNA 184          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.205e-62
Identity = 128/189 (67.72%), Postives = 147/189 (77.78%), Query Frame = 1
Query:  121 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIV REMTRRYMTDMITYADTDVV VGAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWLGGQLFSAMVVRKP H+FLDELG+ YDE ++YVVIKHAALFTST+MS LLARPNV LFNA
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNA 190          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.218e-61
Identity = 125/187 (66.84%), Postives = 145/187 (77.54%), Query Frame = 1
Query:  121 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIV REMTRRYMTDMIT+ADTDVV VGAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWLGGQLFSAMVVR+P H+FLDELG+ YDE ++YVV+KHAALFTST+MS LLARPNV LFNA
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNA 187          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 9.695e-43
Identity = 87/142 (61.27%), Postives = 115/142 (80.99%), Query Frame = 1
Query:  235 ASASPPYDLN-TFKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            + A P Y L+ +F F PI+ES V R MTRRY +D+  YA++D+V VGAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWLGGQLFSAMVVRKP  +FL+E+G+ Y+++ +YVV+KHAALFTST+M+  LA PNV LFNA
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNA 178          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.072e-41
Identity = 85/130 (65.38%), Postives = 104/130 (80.00%), Query Frame = 1
Query:  268 FKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            FKF PI+ES V R MTRRY  D+  YA++D+V +GAGS GLS AY L K  P+++IAIIE SVSPGGGAWLGGQLFSAM++RKP   FL E+G+ Y+++ NYVV+KHAALFTSTIMS +L  PN+ LFNA
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNA 173          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.320e-41
Identity = 87/132 (65.91%), Postives = 107/132 (81.06%), Query Frame = 1
Query:  268 FKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDE--QDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            FKF PI+ES V R MTRRY  D+  YA++DVV VGAGS GLS AY L+K  P+++IAI+E SVSPGGGAWLGGQLFSAMV+R+P  +FL+ELG+ Y+E    NYVV+KHA+LFTST+MS +L+ PNV LFNA
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNA 179          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.185e-40
Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1
Query:  190 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +DV+ VGAGSAGLSCAY L +  P+++I I+E +V+PGGG WLGGQL SAMV RKP   FLD++G+ Y+++ N+VV+KHAALFTST++S +LA PNV +FNA
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNA 182          
BLAST of FC930199 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.185e-40
Identity = 86/130 (66.15%), Postives = 102/130 (78.46%), Query Frame = 1
Query:  268 FKFDPIKESIVPREMTRRYMTDMITYADTDVVEVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPDHIFLDELGIDYDEQDNYVVIKHAALFTSTIMS*LLARPNV*LFNA 654
            FKF PI+ES V R MTRRY  D+  YA++D+V VGAGS GLS  Y L K  P+++IAIIE SVSPGGGAWLGGQLFSAMV+RKP   FL E+G+ Y+++ NYVV+KHAALFTSTIMS +L  PN  LFNA
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNA 177          
The following BLAST results are available for this feature:
BLAST of FC930199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
THI4_CITSI4.282e-9996.86Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL3.198e-7078.11Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH8.708e-6870.83Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE3.205e-6267.72Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE1.218e-6166.84Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO9.695e-4361.27Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX1.072e-4165.38Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR5.320e-4165.91Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_UROFA1.185e-4053.46Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_FUSSH1.185e-4066.15Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]

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Properties
Property NameValue
Genbank descriptionC34004G12EF PostHarvC1 Citrus clementina cDNA clone C34004G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930199 ID=FC930199; Name=FC930199; organism=Citrus clementina; type=EST; length=654bp
TCATCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCAG
CAGGGTGAAGGAGGGGTTAAAAAAAAAAAACATGGCAGCCATGACTTCTA
CAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCA
TCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCAT
CAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTC
CTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTT
CCTCGTGAAATGACACGCAGGTACATGACGGACATGATCACTTATGCTGA
CACTGATGTGGTAGAGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTT
ATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCT
GTTAGCCCCGGCGGAGGCGCGTGGCTCGGAGGACAGCTCTTCTCTGCCAT
GGTTGTGCGCAAACCAGACCACATCTTCCTTGACGAGCTTGGCATCGACT
ACGATGAGCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACC
TCCACTATAATGAGCTAGCTCCTGGCCCGCCCCAACGTCTAGCTCTTTAA
TGCA
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