FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_HUMAN (Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo sapiens GN=ACSS2 PE=1 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.750e-105
Identity = 166/241 (68.88%), Postives = 195/241 (80.91%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YM++ ATTFKY FD+   DV+WCT D GWITGHSYV YGP+ NGA+ V+FEG PTYPD  R W IVDKYKVT FYTAPT +R LM+ G+E VT++SR SL+VLG+VGEPINP AW W+  VVG  RCPI DT+WQTETGG M+TPLPGA P KPGSATFPFFGV P I++E G E+EGE  GYL  K  WPG  RT+YG+HER+ETTYFK FPGYY TGDGC RD+DGY+W+TGR+DD++N
Sbjct:  333 YMLYVATTFKYVFDFHAEDVFWCTADIGWITGHSYVTYGPLANGATSVLFEGIPTYPDVNRLWSIVDKYKVTKFYTAPTAIRLLMKFGDEPVTKHSRASLQVLGTVGEPINPEAWLWYHRVVGAQRCPIVDTFWQTETGGHMLTPLPGATPMKPGSATFPFFGVAPAILNESGEELEGEAEGYLVFKQPWPGIMRTVYGNHERFETTYFKKFPGYYVTGDGCQRDQDGYYWITGRIDDMLN 573          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_MOUSE (Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus GN=Acss2 PE=1 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.528e-103
Identity = 163/241 (67.63%), Postives = 194/241 (80.50%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YM++ ATTFKY FD+ P DV+WCT D GWITGHSYV YGP+ NGA+ V+FEG PTYPD GR W IVDKYKVT FYTAPT +R LM+ G++ VT++SR SL+VLG+VGEPINP AW W+  VVG  RCPI DT+WQTETGG M+TPLPGA P KPGSA+FPFFGV    ++E G E+EGE  GYL  K  WPG  RT+YG+H R+ETTYFK FPGYY TGDGC RD+DGY+W+TGR+DD++N
Sbjct:  333 YMLYVATTFKYVFDFHPEDVFWCTADIGWITGHSYVTYGPLANGATSVLFEGIPTYPDEGRLWSIVDKYKVTKFYTAPTAIRMLMKFGDDPVTKHSRASLQVLGTVGEPINPEAWLWYHRVVGSQRCPIVDTFWQTETGGHMLTPLPGATPMKPGSASFPFFGVALQSLNESGEELEGEAEGYLVFKQPWPGIMRTVYGNHTRFETTYFKKFPGYYVTGDGCRRDQDGYYWITGRIDDMLN 573          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_XANP2 (Acetyl-coenzyme A synthetase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=acsA PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 4.162e-101
Identity = 157/241 (65.15%), Postives = 188/241 (78.01%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY P D+YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YP   R WD++DK+KV IFYTAPT +RSLM+ G E V R SR SLR+LGSVGEPINP AW W++ VVG+ RCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGV P +VD +G  +EG C G L I  SWPG  RT+YGDHER+E TYF  +PG YFTGDGC RD DG++W+TGRVDDVIN
Sbjct:  279 YLVYASMTHQYIFDYHPGDIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGIPNYPSVSRFWDVIDKHKVNIFYTAPTAIRSLMQAGEEPVKRTSRSSLRLLGSVGEPINPEAWEWYYRVVGEERCPIVDTWWQTETGGILITPLPGATKLKPGSATRPFFGVMPEVVDAEGKVLEGACEGNLVIADSWPGQMRTVYGDHERFEQTYFSTYPGKYFTGDGCRRDADGFYWITGRVDDVIN 519          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SACD2 (Acetyl-coenzyme A synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=acsA PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 4.162e-101
Identity = 156/241 (64.73%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  A T KY FDY+P +VYWCT D GW+TGH+Y++YGP+ NGA+ ++FEG PTYP + R W++ DK+ V IFYTAPT +R+LM  G+E+V    RKSLR+LG+VGEPINP AW W++NVVGD RCPI DTWWQTETGG M+TPLPGA   KPGSAT PFFGV+PV++D +G  IEGE  G L IKSSWPG  RT+YGDH+R   TYF  +PGYYFTGDG  RD DGY+W+TGRVDDV+N
Sbjct:  278 YLLQAAMTHKYVFDYQPGEVYWCTADVGWVTGHTYIVYGPLTNGATTLMFEGVPTYPTAARCWEVCDKHNVNIFYTAPTAIRALMGQGDEFVASTQRKSLRILGTVGEPINPEAWEWYYNVVGDRRCPIMDTWWQTETGGHMLTPLPGAIDLKPGSATLPFFGVEPVLLDGEGNIIEGEGEGSLAIKSSWPGQIRTVYGDHDRLIQTYFSTYPGYYFTGDGARRDADGYYWITGRVDDVLN 518          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_METRJ (Acetyl-coenzyme A synthetase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=acsA PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.435e-101
Identity = 159/241 (65.98%), Postives = 190/241 (78.84%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY+  DVYWCT D GW+TGHSY++YGP+ NGA+ ++FEG PTYP + R W++VDK+KV IFYTAPT +RSLM  G   V + SR+SLRVLGSVGEPINP AW W++NVVGD RC I DTWWQTETGG +ITPLPGA   KPGSAT PFFGV+P +VD +G  +EG C G LCI  SWPG  RT+YGDHER+E TYF  +PG YFTGDG  RD DGY+W+TGRVDDVIN
Sbjct:  280 YLVYASMTHEYVFDYREGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGIPTYPSTSRFWEVVDKHKVNIFYTAPTAIRSLMGGGEGPVKKTSRQSLRVLGSVGEPINPEAWEWYYNVVGDRRCSIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVKPQMVDAEGKVLEGPCEGNLCIADSWPGQMRTVYGDHERFEQTYFSTYPGKYFTGDGARRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA2_PSEAE (Acetyl-coenzyme A synthetase 2 OS=Pseudomonas aeruginosa GN=acsA2 PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 7.099e-101
Identity = 157/241 (65.15%), Postives = 193/241 (80.08%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  A T KY FDY   DVYWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YPD+ R W ++DK++V IFYTAPT +R+LMR+G+  V + SR SLR+LGSVGEPINP AW W++ VVG+ RCPI DTWWQTETG  +ITPLPGA   KPGSAT PFFGVQPV++DEKG EI+G  SG L IK+SWP   R++YGDH+R   TYFKP+PGYYF+GDG  RD+DGY+W+TGRVDDVIN
Sbjct:  278 YLLGAAMTHKYVFDYHDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDASRFWQVIDKHQVNIFYTAPTAIRALMREGDAPVRQTSRSSLRLLGSVGEPINPEAWEWYYQVVGEKRCPILDTWWQTETGSILITPLPGATALKPGSATRPFFGVQPVLLDEKGKEIDGAGSGVLAIKASWPSQIRSVYGDHQRMIDTYFKPYPGYYFSGDGARRDEDGYYWITGRVDDVIN 518          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_METPB (Acetyl-coenzyme A synthetase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=acsA PE=3 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 9.271e-101
Identity = 159/241 (65.98%), Postives = 189/241 (78.42%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   DVYWCT D GW+TGHSY++YGP+ NGA+ ++FEG PTYP + R W+++DK+KV IFYTAPT +RSLM  G   V + SR SLRVLGSVGEPINP AW W++ VVGDSRC I DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQPV+VD +G E++G C G LCIK SWPG  RT+YGDHER+E TYF  +   YFTGDG  RD DGY+W+TGRVDDVIN
Sbjct:  280 YLVYASMTHQYVFDYHDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGIPTYPSNSRFWEVIDKHKVNIFYTAPTAIRSLMGGGEGPVKKTSRASLRVLGSVGEPINPEAWDWYYRVVGDSRCSIVDTWWQTETGGILITPLPGATKLKPGSATRPFFGVQPVMVDAEGKELDGACEGNLCIKDSWPGQMRTVYGDHERFEQTYFSTYKNLYFTGDGARRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHIE6 (Acetyl-coenzyme A synthetase OS=Rhizobium etli (strain CIAT 652) GN=acsA PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.211e-100
Identity = 154/241 (63.90%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   D+YWCT D GW+TGHSY++YGP+ N A+ ++FEG P +PD GR W+++DK+KV IFYTAPT +RSLM  G+++VTR SR SLR+LG+VGEPINP AW W++NVVGD RCP+ DTWWQTETGG MITPLPGA   KPGSAT PFFGV+P +VD +G  +EG   G LCI  SWPG  RT+YGDHER+  TYF  + G YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHEYVFDYHHGDIYWCTADVGWVTGHSYIVYGPLANCATTLMFEGVPNFPDQGRFWEVIDKHKVNIFYTAPTAIRSLMGAGDDFVTRSSRSSLRLLGTVGEPINPEAWEWYYNVVGDKRCPVIDTWWQTETGGHMITPLPGAIDLKPGSATVPFFGVKPQLVDNEGKVLEGAADGNLCITDSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_METC4 (Acetyl-coenzyme A synthetase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=acsA PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.211e-100
Identity = 158/241 (65.56%), Postives = 190/241 (78.84%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   +VYWCT D GW+TGHSY++YGP+ NGA+ ++FEG PTYP + R W+++DK+KV IFYTAPT +RSLM  G   V + SR+SLRVLGSVGEPINP AW W++ VVGDSRCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQPV+VD +G  ++G C G LCIK SWPG  RT+YGDHER+E TYF  +   YFTGDG  RD DGY+W+TGRVDDVIN
Sbjct:  280 YLVYASMTHQYVFDYHDGEVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGIPTYPSNSRFWEVIDKHKVNIFYTAPTAIRSLMGGGEGPVKKTSRQSLRVLGSVGEPINPEAWDWYYRVVGDSRCPIVDTWWQTETGGILITPLPGATRLKPGSATLPFFGVQPVMVDAEGKILDGACEGNLCIKDSWPGQMRTVYGDHERFEQTYFSTYKDLYFTGDGARRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHILW (Acetyl-coenzyme A synthetase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=acsA PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.581e-100
Identity = 154/241 (63.90%), Postives = 190/241 (78.84%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A T +Y FDY   DVYWCT D GW+TGHSY++YGP+ N A+ ++FEG P +PD GR W+++DK+KV IFYTAPT +RSLM  G+++VTR SR SLR+LG+VGEPINP AW W++NVVGD RCP+ DTWWQTETGG MITPLPGA   KPGSAT PFFG++P +VD +G  +EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YFTGDGC RD DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAAMTHEYVFDYHDGDVYWCTADVGWVTGHSYIVYGPLANCATTLMFEGVPNFPDQGRFWEVIDKHKVNIFYTAPTAIRSLMGAGDDFVTRSSRSSLRLLGTVGEPINPEAWEWYYNVVGDKRCPVIDTWWQTETGGHMITPLPGAIDLKPGSATVPFFGIKPELVDNEGKVLEGAADGNLCITDSWPGQMRTVYGDHDRFIQTYFSTYKGKYFTGDGCRRDADGYYWITGRVDDVLN 521          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_HUMAN4.750e-10568.88Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo ... [more]
ACSA_MOUSE1.528e-10367.63Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus m... [more]
ACSA_XANP24.162e-10165.15Acetyl-coenzyme A synthetase OS=Xanthobacter autot... [more]
ACSA_SACD24.162e-10164.73Acetyl-coenzyme A synthetase OS=Saccharophagus deg... [more]
ACSA_METRJ5.435e-10165.98Acetyl-coenzyme A synthetase OS=Methylobacterium r... [more]
ACSA2_PSEAE7.099e-10165.15Acetyl-coenzyme A synthetase 2 OS=Pseudomonas aeru... [more]
ACSA_METPB9.271e-10165.98Acetyl-coenzyme A synthetase OS=Methylobacterium p... [more]
ACSA_RHIE61.211e-10063.90Acetyl-coenzyme A synthetase OS=Rhizobium etli (st... [more]
ACSA_METC41.211e-10065.56Acetyl-coenzyme A synthetase OS=Methylobacterium c... [more]
ACSA_RHILW1.581e-10063.90Acetyl-coenzyme A synthetase OS=Rhizobium legumino... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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