FC930218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.170e-82 Identity = 151/179 (84.36%), Postives = 172/179 (96.09%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNN-DSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQARR 704 MAI+F+LVARG+VVL+E SAT+TNAS+I++QIL+K+PGN+ DSH+SYSQDRYIFHVKRTDGLTVLCMAD+TAGR IPFAFL+DIHQRFVKTYGRA+ SAQAY MNDEFSRVLSQQME+YS+DPNADR++RIKGEMSQVRNVMIENIDKVL+RG+RLELLVDKT NM GNTFRFRKQARR Sbjct: 1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYSNDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARR 179
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2) HSP 1 Score: 302.753 bits (774), Expect = 1.204e-81 Identity = 148/178 (83.15%), Postives = 171/178 (96.07%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQARR 704 MAIL++LVARG+VVL+E +AT+TNAS IA+QIL+K+PG+NDS+VSYSQDRY+FHVKRTDGLTVLCMA++TAGRRIPFAFLEDIHQRFV+TYGRAV +A AY MN+EFSRVLSQQ++YYS+DPNADRINRIKGEM+QVR VMIENIDKVL+RG+RLELLVDKTANM GNTFRFRKQARR Sbjct: 1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARR 178
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 4.577e-81 Identity = 146/178 (82.02%), Postives = 167/178 (93.82%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQARR 704 M+IL++LVARG+VVLAE S T+TNAS IA+QIL+KIPGN DSHVSYSQDRY+FHVKRTDGLTVLCMAD+ AGRRIPF+FLEDIHQRFV+TYGRA+ SAQAY MNDEFSRVL+QQ+EYYS+DPNAD I+RIKGEM+QVR+VMIENID +L+RG+RLELLVDKTANM GNTFRFRKQ RR Sbjct: 1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRR 178
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60 Identity = 106/179 (59.22%), Postives = 148/179 (82.68%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKI-PGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQARR 704 MAI++++VARG+VVLAE SA N A+ R+IL+K+ P +D + +SQDRYIFH+ R+DGLT LCMA+DT GRR+PF++LE+IH RF+K YG+ +A AY MNDEFSRVL QQME++S +P+ D +NR++GE+S++R+VM+ENI+K++ERGDR+ELLVDKTA M ++F FRKQ++R Sbjct: 1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKR 179
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39 Identity = 81/179 (45.25%), Postives = 124/179 (69.27%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENI-DKVLERGDRLELLVDKTANMXGNTFRFRKQARR 704 M I++SLVARGS VLAE ++T N I R+ILD IP N D+ +SY ++YIFH +D LT LCMAD+ GRRIPF FL+D+ RF YG +A AYGMN +FSR L M++YS+ D ++R E+ +V+N+++ +I ++L+RG+++E+LV++T + +F+F+KQ+++ Sbjct: 1 MPIIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPN-DTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMYGDKGKTAIAYGMNSDFSRTLENLMDHYSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQ 178
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.061e-33 Identity = 69/177 (38.98%), Postives = 111/177 (62.71%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQAR 701 MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D + LC+ DD R F FL ++ +RF TYG +A Y MN EFS VL+ Q++++S++ + DR+ + ++ +++ +M+ NID V +RG+RLELL+DKT N+ ++ F+ +R Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSR 176
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 68/177 (38.42%), Postives = 112/177 (63.28%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQAR 701 MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D + LC+ DD R F+FL ++ +RF TYG +A Y MN EFS VL+ Q++++S++ + D++ + ++ +++ +M+ NID V +RG+RLELL+DKT N+ ++ F+ +R Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSR 176
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 69/177 (38.98%), Postives = 110/177 (62.15%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQAR 701 MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D + LC+ DD R F FL +I +RF TYG +A Y MN EFS VL+ Q++++S++ D++ + ++ +++ +M+ NID V +RG+RLELL+DKT N+ ++ F+ +R Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSR 176
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 69/177 (38.98%), Postives = 109/177 (61.58%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQAR 701 MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D + LC+ DD R F FL +I +RF TYG +A Y MN EFS VL+ Q++Y+S+ D++ + ++ +++ +M+ NID V +RG++LELL+DKT N+ ++ F+ +R Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSR 176
BLAST of FC930218 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 69/177 (38.98%), Postives = 110/177 (62.15%), Query Frame = 3 Query: 171 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMXGNTFRFRKQAR 701 MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D + LC+ DD R F FL +I +RF TYG +A Y MN EFS VL+ Q++++S++ D++ + ++ +++ +M+ NID V +RG+RLELL+DKT N+ ++ F+ +R Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSR 176 The following BLAST results are available for this feature:
BLAST of FC930218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930218 ID=FC930218; Name=FC930218; organism=Citrus clementina; type=EST; length=704bpback to top |