FC930223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 1.532e-65 Identity = 118/144 (81.94%), Postives = 130/144 (90.28%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPDNDT 432 GRVIRAQR GAGS FKSHTHHRKGPA+FRSL F E NGYLKGVV +II DPGRGAPL +VTFRHPFR+ KQ ELF+AAEGMYT QF+YC KKATL+ GNVLP+RSIPEGAVVCNVEHHVGDRGVLARASG YA++I+HNPD+DT Sbjct: 2 GRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDT 145
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 5.820e-65 Identity = 116/144 (80.56%), Postives = 128/144 (88.89%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPDNDT 432 GRVIRAQR GAGS FKSHTHHRKGPA+FRSL F E NGYLKGVV +II DPGRGAPL +V FRHPFR+ KQ ELF+AAEGMYT QF+YC KKATL+ GNVLP+RSIPEGAV+CNVEHHVGDRGV ARASG YA++I+HNPDNDT Sbjct: 2 GRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDT 145
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.098e-63 Identity = 115/144 (79.86%), Postives = 125/144 (86.81%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPDNDT 432 GRVIRAQR GAGS FKSHTHHRKGPA+FR+L F E NGYLKGV+ ++I DPGRGAPL +VTFRHPFRY Q ELF+AAEGMYT QFVYC KKATLM GNVLP+RSIPEGAVVCNVEH VGDRGV AR SG YA++ISHNPDN T Sbjct: 2 GRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGDYAIVISHNPDNGT 145
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 3.194e-63 Identity = 114/144 (79.17%), Postives = 125/144 (86.81%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPDNDT 432 GR+IRAQR GAGS FKSHTHHRKGPA+FRSL F E NGYLKGV+ ++I DPGRGAPL +VTFR+PFRY Q ELF+AAEGMYT QFVYC KKATLM GNVLP+RSIPEGAVVCNVEH VGDRGV AR SG YA++ISHNPDN T Sbjct: 2 GRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGAYAIVISHNPDNGT 145
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 7.363e-60 Identity = 110/145 (75.86%), Postives = 126/145 (86.90%), Query Frame = 1 Query: 1 GRVIRAQRMGA-GSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPDNDT 432 GRVIRAQR GA GS FKSHTHHRKGPA+FRSL + E NGYLKG+V +II DPGRGAPL +V FRHPFRYMKQ ELF+AAEGMYT Q++YC KKA LM GNVLP+ SIPEGAV+CNVE HVGDRG LARASG YA++I+HNP+++T Sbjct: 2 GRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNT 146
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 189.504 bits (480), Expect = 4.950e-48 Identity = 91/141 (64.54%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS FK+H HRKG A+ R++ F+E NGY+KG+V II DPGRGAPL +V FR P+R+ K+ ELF+AAEG++T QFVYC KKA L GNVLPV ++PEG +VC VE GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 187.193 bits (474), Expect = 2.457e-47 Identity = 90/141 (63.83%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS FK+H HRKG A+ R++ F+E +GY+KG+V II DPGRGAPL +V FR P+R+ K+ ELF+AAEG++T QFVYC KKA L GNVLPV ++PEG +VC VE GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_RAT (60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 9.335e-47 Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS F++H HRKG A+ R++ F+E +GY+KG+V II DPGRGAPL +V FR P+R+ K+ ELFIAAEG++T QFVYC KKA L GNVLPV ++PEG +VC +E GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_PONAB (60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3) HSP 1 Score: 185.267 bits (469), Expect = 9.335e-47 Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS F++H HRKG A+ R++ F+E +GY+KG+V II DPGRGAPL +V FR P+R+ K+ ELFIAAEG++T QFVYC KKA L GNVLPV ++PEG +VC +E GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_MOUSE (60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 9.335e-47 Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS F++H HRKG A+ R++ F+E +GY+KG+V II DPGRGAPL +V FR P+R+ K+ ELFIAAEG++T QFVYC KKA L GNVLPV ++PEG +VC +E GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142 The following BLAST results are available for this feature:
BLAST of FC930223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930223 ID=FC930223; Name=FC930223; organism=Citrus clementina; type=EST; length=432bpback to top |