FC930232

Overview
NameFC930232
Unique NameFC930232
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15157 contig Ccv1_Contig15157:301..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_ARATH (Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3)

HSP 1 Score: 328.561 bits (841), Expect = 1.718e-89
Identity = 158/215 (73.49%), Postives = 178/215 (82.79%), Query Frame = 1
Query:    4 SHQNFTLA--GRKDLVIRAQNFGVKSEPKLIDMMESGKELPELNTN-LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 639
            +H N  L   G++ + +     G KSE    D ME  +    +N   LY  +EPYS+G LKVSD+HT+YWEQSG P GHPVVFLHGGPGGGT PSNRRFFDP+FYRI+LFDQRGAGKSTPHACL++NTTWDL++DIEKLR+HL+IPEW VFGGSWGSTLALAYS +HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRDLIPENER
Sbjct:   22 NHNNLNLLFPGQRKIQVSC---GGKSEVLKSDTMEPHEAETFVNKRTLYAPIEPYSSGNLKVSDVHTLYWEQSGKPDGHPVVFLHGGPGGGTAPSNRRFFDPEFYRIVLFDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQSHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRDLIPENER 233          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_PLEBO (Probable proline iminopeptidase OS=Plectonema boryanum GN=pip PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.415e-67
Identity = 117/168 (69.64%), Postives = 137/168 (81.55%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 639
            LYP + PY +G+L VS +HTIY+EQSGNP G PVVFLHGGPGGGT P+ R++FDP  +RIILFDQRGAGKSTPHA L +NTTWDL+ DIEKLR HL I  W VFGGSWGSTL+LAYS  HPD+  GL+LRGIFLLR+KEI WFY+ GA+ I+PDAWE + + IP  ER
Sbjct:    4 LYPAIAPYQSGMLPVSALHTIYYEQSGNPNGKPVVFLHGGPGGGTIPTYRQYFDPSKWRIILFDQRGAGKSTPHAELRENTTWDLVSDIEKLRSHLNIDRWFVFGGSWGSTLSLAYSQTHPDRCLGLILRGIFLLRRKEILWFYQDGASWIFPDAWEHYLEPIPPEER 171          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_XYLFA (Proline iminopeptidase OS=Xylella fastidiosa GN=pip PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.086e-59
Identity = 107/168 (63.69%), Postives = 127/168 (75.60%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 639
            LYP V P+  GIL V D H +Y+EQ GNP G PVV LHGGPG G     RRF DPD YRI+LFDQRGAG+STPHA L  NTTWDL+ DIEKLR  L I  WQVFGGSWGSTLALAY+  HP++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ +  +IP  ER
Sbjct:    4 LYPEVTPFEHGILCVDDNHRLYYEQCGNPHGKPVVILHGGPGSGCNDKMRRFHDPDKYRIVLFDQRGAGRSTPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRGIFMLRRWELEWFYQEGASHLFPDAWDRYIAVIPPVER 171          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_XYLFT (Proline iminopeptidase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pip PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.420e-59
Identity = 106/168 (63.10%), Postives = 126/168 (75.00%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 639
            LYP V P+  G+L V D H +Y+EQ GNP G PVV LHGGPGGG     RRF DPD YRI+LFDQRGAG+S PHA L  NTTWDL+ DIEKLR  L I  WQVFGGSWGSTLALAY+  HP++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ +   IP  ER
Sbjct:    4 LYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDKYRIVLFDQRGAGRSMPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWDRYIAAIPPVER 171          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_XANCI (Proline iminopeptidase OS=Xanthomonas campestris pv. citri GN=pip PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58
Identity = 105/168 (62.50%), Postives = 124/168 (73.81%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 639
            LYP + PY  G LKV D HT+Y+EQ GNP G PVV LHGGPGGG     RRF DP  YRI+LFDQRG+G+STPHA L  NTTWDL+ DIE+LR HL +  WQVFGGSWGSTLALAY+         LVLRGIFLLR+ E++WFY+ GA+ ++PDAWE + + IP  ER
Sbjct:    4 LYPEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAADPSAAGHQLVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVER 171          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_NEIMB (Proline iminopeptidase OS=Neisseria meningitidis serogroup B GN=pip PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.578e-56
Identity = 98/169 (57.99%), Postives = 125/169 (73.96%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENER 639
            +Y   +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P  R FF+PD +RI++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+  HP++V GLVLRGIFL R  E  W  E GG + IYP+ W+ F   I EN R
Sbjct:    1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKFVAPIAENRR 169          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_NEIMA (Proline iminopeptidase OS=Neisseria meningitidis serogroup A GN=pip PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.578e-56
Identity = 98/169 (57.99%), Postives = 125/169 (73.96%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENER 639
            +Y   +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P  R FF+PD +RI++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+  HP++V GLVLRGIFL R  E  W  E GG + IYP+ W+ F   I EN R
Sbjct:    1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKFVAPIAENRR 169          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_NEIGO (Proline iminopeptidase OS=Neisseria gonorrhoeae GN=pip PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.578e-56
Identity = 98/169 (57.99%), Postives = 125/169 (73.96%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENER 639
            +Y   +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P  R FF+PD +RI++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+  HP++V GLVLRGIFL R  E  W  E GG + IYP+ W+ F   I EN R
Sbjct:    1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRIVIIDQRGCGRSHPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKFVAPIAENRR 169          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_SERMA (Proline iminopeptidase OS=Serratia marcescens GN=pip PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.515e-56
Identity = 92/168 (54.76%), Postives = 124/168 (73.81%), Query Frame = 1
Query:  136 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 639
            LYP +  Y +G L   D H IYWE SGNP G P VF+HGGPGGG +P +R+ FDP+ Y+++LFDQRG G+S PHA LD NTTW L+ DIE+LR+   + +W VFGGSWGSTLALAY+  HP++V+ +VLRGIF LRK+ + W+Y+ GA+  +P+ WE    ++ ++ER
Sbjct:    7 LYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDER 174          
BLAST of FC930232 vs. ExPASy Swiss-Prot
Match: PIP_STRCO (Probable proline iminopeptidase OS=Streptomyces coelicolor GN=SCO1989 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.993e-37
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  133 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHAC-----LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 639
            +LYP +EPY  G+L V D + +YWE  GNP G P V LHGGPG   +P  RR+FDP  YRI+L DQRGAG+S P A      +  NTT  L+ D+E+LR HL I  W V+G SWGS L L Y+  HP  VT LVL G+      E+      G   I+P+A E F   +P + R
Sbjct:    2 SLYPEIEPYDHGMLDVGDGNHVYWETCGNPHGKPAVVLHGGPGSRASPGLRRYFDPAAYRIVLLDQRGAGRSLPRASAPDTDMSVNTTAHLMADLERLRVHLGIERWLVWGVSWGSVLGLRYAQTHPGVVTELVLTGVATGSNAEVA-LLTRGLGNIFPEAHERFLAELPPDAR 174          
The following BLAST results are available for this feature:
BLAST of FC930232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PIP_ARATH1.718e-8973.49Proline iminopeptidase OS=Arabidopsis thaliana GN=... [more]
PIP_PLEBO1.415e-6769.64Probable proline iminopeptidase OS=Plectonema bory... [more]
PIP_XYLFA1.086e-5963.69Proline iminopeptidase OS=Xylella fastidiosa GN=pi... [more]
PIP_XYLFT2.420e-5963.10Proline iminopeptidase OS=Xylella fastidiosa (stra... [more]
PIP_XANCI7.784e-5862.50Proline iminopeptidase OS=Xanthomonas campestris p... [more]
PIP_NEIMB5.578e-5657.99Proline iminopeptidase OS=Neisseria meningitidis s... [more]
PIP_NEIMA5.578e-5657.99Proline iminopeptidase OS=Neisseria meningitidis s... [more]
PIP_NEIGO5.578e-5657.99Proline iminopeptidase OS=Neisseria gonorrhoeae GN... [more]
PIP_SERMA9.515e-5654.76Proline iminopeptidase OS=Serratia marcescens GN=p... [more]
PIP_STRCO1.993e-3747.13Probable proline iminopeptidase OS=Streptomyces co... [more]

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Properties
Property NameValue
Genbank descriptionC34005B12EF PostHarvC1 Citrus clementina cDNA clone C34005B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930232 ID=FC930232; Name=FC930232; organism=Citrus clementina; type=EST; length=641bp
AGATCCCATCAGAATTTCACTCTCGCAGGGAGGAAGGATTTAGTAATACG
TGCACAAAATTTTGGGGTTAAGAGTGAGCCAAAGCTCATTGATATGATGG
AATCAGGAAAGGAATTACCAGAATTGAATACGAATCTTTATCCTTATGTA
GAGCCATACAGTACAGGCATTTTGAAGGTTTCTGATATTCACACAATCTA
CTGGGAGCAGTCTGGAAACCCTACCGGGCATCCTGTTGTGTTTCTTCATG
GAGGTCCAGGAGGAGGCACTACACCAAGTAATCGAAGATTCTTTGATCCC
GATTTTTACCGTATCATTTTATTTGATCAGCGAGGTGCAGGAAAAAGTAC
CCCTCATGCTTGCTTGGATCAAAACACCACATGGGATCTCATTGATGACA
TTGAAAAGTTGAGACAACACCTAGAAATTCCAGAATGGCAGGTATTTGGT
GGATCATGGGGAAGCACACTTGCTCTTGCATACAGCCTGGCACACCCCGA
CAAGGTTACTGGCTTGGTCCTCAGGGGGATCTTTCTTTTGCGAAAGAAAG
AGATTGATTGGTTTTATGAGGGTGGTGCTGCTGCTATATACCCTGATGCA
TGGGAGTCATTCAGAGACCTCATTCCAGAAAATGAAAGAAG
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