FC930234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 5.171e-90 Identity = 159/179 (88.83%), Postives = 167/179 (93.30%), Query Frame = 2 Query: 152 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 MGDA TDAGMDAVQ+RLMFED+CILVDEND VVGH+ KYNCH ME+IES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+ENALG RNAAQRKLLDELGI AEDVPVD+F PLGRILYKAPSDGKWGEHELDYLLFIVRDV+VNPNPDEVA+ YV R Sbjct: 1 MGDAATDAGMDAVQKRLMFEDKCILVDENDNVVGHDTKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLLDELGIPAEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVTR 179
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 3.352e-89 Identity = 156/179 (87.15%), Postives = 167/179 (93.30%), Query Frame = 2 Query: 152 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 MGD TDAGMDAVQRRLMFEDECILVDEND VVGH+ KYNCH ME+IES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHP YRESEL++ENALGVRNAAQRKLLDELGI AEDVPVD+F PLGR+LYKAPSDGKWGEHELDYLLFI+RDV+V+PNPDEVA+ YVN+ Sbjct: 75 MGDTATDAGMDAVQRRLMFEDECILVDENDHVVGHDTKYNCHLMEKIESDNLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLLDELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKYVNQ 253
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.274e-88 Identity = 157/175 (89.71%), Postives = 164/175 (93.71%), Query Frame = 2 Query: 164 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 T DAGMDAVQRRLMFEDECILVDE DRVVGH++KYNCH ME IE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI++NALGVRNAAQRKLLDELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHELDYLLFIVRDV V PNPDEVAE YV+R Sbjct: 55 TKDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKYVSR 229
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2) HSP 1 Score: 323.553 bits (828), Expect = 6.321e-88 Identity = 156/180 (86.67%), Postives = 168/180 (93.33%), Query Frame = 2 Query: 149 TMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 TMG+ DAGMDAVQRRLMFEDECILVDEND+VVGHE+KYNCH ME+IES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AED+PVD+F PL RILYKAPSDGKWGEHELDYLLFI+RDV+++PNPDEVAE Y+NR Sbjct: 54 TMGEVV-DAGMDAVQRRLMFEDECILVDENDKVVGHESKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENCLGVRNAAQRKLLDELGIPAEDLPVDQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPNPDEVAEVKYMNR 232
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2) HSP 1 Score: 323.168 bits (827), Expect = 8.256e-88 Identity = 155/175 (88.57%), Postives = 163/175 (93.14%), Query Frame = 2 Query: 164 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 + DAGMDAVQRRLMFEDECILVDENDRVVGH+ KYNCH ME+IE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEEN LGVRNAAQRKL DELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHE+DYLLFIVRDV + PNPDEVAE YV+R Sbjct: 4 SNDAGMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSR 178
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2) HSP 1 Score: 320.472 bits (820), Expect = 5.351e-87 Identity = 157/179 (87.71%), Postives = 167/179 (93.30%), Query Frame = 2 Query: 152 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 MG+A DAGMDAVQRRLMF+DECILVDE DRVVGHE+KYNCH E+IES N+LHRAFSVFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTPL R+LYKAPSDGKWGEHELDYLLFIVRDV+V+PNPDEVAE YVNR Sbjct: 54 MGEAA-DAGMDAVQRRLMFDDECILVDEVDRVVGHESKYNCHMWEKIESGNMLHRAFSVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPNPDEVAEIKYVNR 231
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.530e-86 Identity = 152/179 (84.92%), Postives = 165/179 (92.18%), Query Frame = 2 Query: 152 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 MG+A DAGMDAVQRRLMF+DECILVDE D VVGHE+KYNCH E+IES N+LHRAF+VFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTP+ R+LYKAPSDGKWGEHELDYLLFIVRDV ++PNPDEVA+ YVNR Sbjct: 57 MGEAAADAGMDAVQRRLMFDDECILVDEVDCVVGHESKYNCHLWEKIESGNMLHRAFTVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKYVNR 235
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 3.391e-49 Identity = 103/179 (57.54%), Postives = 129/179 (72.07%), Query Frame = 2 Query: 152 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 M + +TD +D Q +LM E CILVDENDR +G E K NCH E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL SEL E +A+GVR AAQR+L ELGI E+VP +E L RI YKA SD WGEHE+DY+L + ++V++NP+P+E+ Y YV + Sbjct: 1 MPEVSTD-DLDERQVQLMAE-MCILVDENDRRIGAETKKNCHLNENIER-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPSELEENDAIGVRRAAQRRLKAELGIPMEEVPPEEINYLTRIHYKAQSDSIWGEHEIDYILLVKKNVTLNPDPNEIKSYCYVTK 176
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI1_MACFA (Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis GN=IDI1 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 7.554e-49 Identity = 101/179 (56.42%), Postives = 129/179 (72.07%), Query Frame = 2 Query: 152 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 M + TD +D Q +L+ E CIL+DEND +G E K NCH E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ + YV++ Sbjct: 1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILFVRKNVTLNPDPNEIKSFCYVSK 176
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.289e-48 Identity = 98/170 (57.65%), Postives = 125/170 (73.53%), Query Frame = 2 Query: 179 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYVNR 688 +D Q +L+ E CIL+DEND +G E K NCH E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL +EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y YV++ Sbjct: 9 LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSK 176 The following BLAST results are available for this feature:
BLAST of FC930234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930234 ID=FC930234; Name=FC930234; organism=Citrus clementina; type=EST; length=689bpback to top |