FC930258

Overview
NameFC930258
Unique NameFC930258
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930258 vs. ExPASy Swiss-Prot
Match: YCR3_YEAST (Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae GN=YCR023C PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 49/145 (33.79%), Postives = 83/145 (57.24%), Query Frame = 3
Query:  108 KDTKSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVSFWMAVLTRFLLGSLNGLLGPIKAYACEIFRE-EHQALGLSTV 539
            K+   G P  +L  + ++     +  SSLFP++YFM++DF IA  +  +  Y+GY+ SSF   + +++  WG  ++++GRK  +  G     +   + G S +F+ A++ R L+G LNG +G I+    EI  E +HQAL  ST+
Sbjct:    9 KEQMDGFPWVQLVVVSLVRFSEPIAFSSLFPYVYFMVRDFNIAPNDAQVSKYSGYLSSSFALCQVISAYHWGRFSEKHGRKITLTCGLIGTSVSLLILGFSRNFYQALVARSLMGLLNGNVGVIRTIIGEIATERKHQALAFSTM 153          
The following BLAST results are available for this feature:
BLAST of FC930258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCR3_YEAST1.205e-2033.79Uncharacterized membrane protein YCR023C OS=Saccha... [more]
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Properties
Property NameValue
Genbank descriptionC34005E02EF PostHarvC1 Citrus clementina cDNA clone C34005E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930258 ID=FC930258; Name=FC930258; organism=Citrus clementina; type=EST; length=711bp
GGAGCTGAGATTCAATGGCTGCAGGGGAGGAGAAGTTGAGAGAGCCATTT
TTGAAGAACGAGAAGAGATATTATGAGAATTGCCCAGGGTGTAAAGTTGA
TCAACTTAAAGACACGAAAAGCGGTTTGCCTATTACGGAACTGTTTTCTA
TATGGATTATTGTGCTTTGCACTGCGCTGCCGATATCGTCACTCTTCCCG
TTCCTTTACTTTATGATTAAGGATTTTCAAATTGCGAAAAGAGAGGAAGA
TATTGGCTCCTATGCTGGCTATGTGGGGTCTTCATTTATGTTTGGCAGAG
CTTTGACATCTGTTTTCTGGGGATTAGTGGCTGACCGCTATGGTAGAAAA
CCTGTTATAATAATGGGGACTGCCTCAGTGGTTATTTTCAACACTCTCTT
TGGGCTCAGTGTGAGTTTTTGGATGGCTGTACTAACAAGGTTTCTTCTTG
GGAGTTTGAATGGCTTACTTGGACCAATAAAGGCATATGCATGTGAAATA
TTCCGTGAGGAGCACCAAGCTTTAGGACTGTCAACGGTTAGCACAGCATG
GGGAATAGGATTGATTATTGGTCCAGCACTAGGTGGTTTTCTGGCTCAGC
CTGCAGAGAAATATCCAAATTTATTTTCAAGCGAATCTCTGTTTGGAAAA
TTTCCTATTTCTTGCCTTGCCTCTGCATATCACTTTTTGCTTTTTGGGTA
CCATTGCTGCT
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