FC930273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.518e-44 Identity = 87/98 (88.78%), Postives = 89/98 (90.82%), Query Frame = 2 Query: 137 MVPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIINPN 430 M PEPED IKDEKNPRPLDEDDIALLKTYGLGPYST IKKA KE+KD+ KKV DLCGIKESDTGLAAPSQWDLVSDK MMQEEQPL VARCT IINPN Sbjct: 1 MAPEPED-IKDEKNPRPLDEDDIALLKTYGLGPYSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPN 97
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.577e-43 Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 2 Query: 137 MVPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIINPN 430 M PEPED+I +EKNPRPLDEDDIALLKTYGLGPYSTSIKK KEIK+M KK+ DLCGIKESDTGLA PSQWDLVSDK MMQEEQPL VARCT II+PN Sbjct: 1 MAPEPEDDIMNEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPN 98
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 5.165e-42 Identity = 84/98 (85.71%), Postives = 86/98 (87.76%), Query Frame = 2 Query: 137 MVPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIINPN 430 M E ED++KDEKNPRPLDEDDIALLKTYGLGPYS SIKK KEIKDM KKV DL GIKESDTGLAAPSQWDLVSDK MMQEEQPL VARCT IINPN Sbjct: 1 MAIEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPN 98
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.563e-41 Identity = 81/98 (82.65%), Postives = 86/98 (87.76%), Query Frame = 2 Query: 137 MVPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIINPN 430 MV + EDEI+DEKNPRPLDEDDIALLKTYGLGPYS IKK KEIKD+ KK+ DLCGIKESDTGLA PSQWDLVSDK MMQEEQPL VARCT II+PN Sbjct: 1 MVRDIEDEIRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPN 98
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.393e-25 Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 152 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIIN 424 EDE+ +E P LDE DIALLK+YG+GPYS SI+ ++IK M KV +LCGIKESDTG+ PSQWDLV DK EE PL VARCT II+ Sbjct: 8 EDELLNETAPVALDEGDIALLKSYGVGPYSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVARCTKIID 98
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 107.842 bits (268), Expect = 1.846e-23 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 152 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIIN 424 ++E KD+K R LDE DIALLKTYG YS IK+ +I+ + KK+ +L GIKESDTGLA P+ WDL +DK +Q EQPL VARCT IIN Sbjct: 13 KEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIIN 103
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 2.410e-23 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 152 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIIN 424 EDE KD+K R LDE DIALLKTYG YS IK+ +I+ + KK+ +L GIKESDTGLA P+ WDL +DK +Q EQPL VARCT IIN Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIIN 103
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 2.410e-23 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 152 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIIN 424 EDE KD+K R LDE DIALLKTYG YS IK+ +I+ + KK+ +L GIKESDTGLA P+ WDL +DK +Q EQPL VARCT IIN Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIIN 103
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 2.410e-23 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 152 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIIN 424 EDE KD+K R LDE DIALLKTYG YS IK+ +I+ + KK+ +L GIKESDTGLA P+ WDL +DK +Q EQPL VARCT IIN Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIIN 103
BLAST of FC930273 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 2.410e-23 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 152 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAYKEIKDMGKKVYDLCGIKESDTGLAAPSQWDLVSDKHMMQEEQPLLVARCTMIIN 424 EDE KD+K R LDE DIALLKTYG YS IK+ +I+ + KK+ +L GIKESDTGLA P+ WDL +DK +Q EQPL VARCT IIN Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIIN 103 The following BLAST results are available for this feature:
BLAST of FC930273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930273 ID=FC930273; Name=FC930273; organism=Citrus clementina; type=EST; length=431bpback to top |