FC930280

Overview
NameFC930280
Unique NameFC930280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3496 contig Ccv1_Contig3496:123..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.614e-50
Identity = 101/197 (51.27%), Postives = 135/197 (68.53%), Query Frame = 3
Query:   54 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADP 644
            MD +  V  LL S+IL+  L           + LPPGPT  P+IGNL  LG  PH+SLAKLAKIHGPIMSL+ GQ+TT+V SSA  A+E+L+ QD +F  R +PDA+ A+ H    + +L V T WR LR+I +S+ FS+  L+A QHLR KK+++L+AY ++   +   +HIG+AAF T+LNL+SNTIFS DL DP
Sbjct:    1 MDFLIIVSTLLLSYILIWVLGV------GKPKNLPPGPTRLPIIGNLHLLGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNLLSNTIFSKDLTDP 191          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.028e-35
Identity = 74/167 (44.31%), Postives = 106/167 (63.47%), Query Frame = 3
Query:  138 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLA 638
            S +  LPPGP   P++GN+ +LG  PH+SLA  +K +GPIMSLK G++T VV SS   AKE L+  D     RT  DA+ A  HH+  + W+P +  WR L+K    +  S + LDA Q LR +K+++L++ V E    G AI + +A+F T+ N+ISN +FS+DLA
Sbjct:   33 SSTGTLPPGPPILPLVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERGEAIDLARASFVTSFNIISNALFSVDLA 199          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 82/205 (40.00%), Postives = 125/205 (60.98%), Query Frame = 3
Query:   54 MDMVSCVP-WLLFSWI---LVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATL-WRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSK 653
            MD++S    +LLF +I    +++    SR     +  LPPGP   P+IGN+ ++G  PH S A LAKI+GPIMSLKFG + +VV +S   A+E+L+  D     R   D+I   GH E  + WLP ++  WR LRK+  +  FS ++ +A + LR KK+Q+L++++ E+     A+ I +A++ T LN+ISN +FS+DL    SK
Sbjct:    1 MDIISGQALFLLFCFISSCFLISTTARSRRSSGRAATLPPGPPRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNILFSVDLGSYDSK 205          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.814e-32
Identity = 66/174 (37.93%), Postives = 104/174 (59.77%), Query Frame = 3
Query:  138 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS---IDLADPTS 650
            SG + LPPGP P+P++GNLL+LG+KPH   A+LA+ +G I +LK G  T VV S+++ A EIL+  D     R +  +    GH E  + W      W+NLRK+C +  F+ + +++  H+R KK ++++ Y+ +  + G  + I +  FGT +N+  N IFS    +L DP S
Sbjct:   23 SGHKNLPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGDPNS 194          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.279e-32
Identity = 72/190 (37.89%), Postives = 118/190 (62.11%), Query Frame = 3
Query:   84 LFSWILVVALNYFSRGFKSGSRRL---PPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWL-PVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLAD 641
            LF ++L   + +F+      SR++   PPGP   P+IGN+  +G  PH S A L+K +GPIMSLKFG + TVV +S   A+E+L+  D    +RT  ++I +  H +  + WL P ++ WR LRK+  +  FS ++++A + LR  K+++L++++ E+     A+ I +A F T LN+ISN +FS+DL +
Sbjct:   12 LFCFVLSFFIIFFTTTRPRSSRKVVPSPPGPPRLPIIGNIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNILFSVDLGN 201          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.894e-32
Identity = 67/188 (35.64%), Postives = 110/188 (58.51%), Query Frame = 3
Query:   96 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS---IDLADPTS 650
            +++ ++ Y   G  SG + LPPGP P+P++GNLL+LG+KPH   A+LA+ +G I +LK G  T VV S+++ A EIL+  D     R +  +    GH E  + W      W+NLRK+C +  F+ + +++  H+R KK ++++ Y+ +  + G  + I +  FGT +N+  N IFS    +L  P S
Sbjct:   11 VIISSILYLLFG-SSGHKNLPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGXPNS 195          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31
Identity = 71/195 (36.41%), Postives = 118/195 (60.51%), Query Frame = 3
Query:   81 LLFSWILVVALNYF---SRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATL-WRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSK 653
            LLF +IL   L +    S     G+  LPPGP   P+IGN+  +G  PH+S A+L+K +GP+MSLK G + TVV +S   A+E+L+  D     R+  +A+ +  H +  + WLP ++  WR LR++  +   S ++++A + LR  K+++L++++ E+     ++ I + AF TTLN+ISN +FS+DL    +K
Sbjct:   11 LLFCFILSCFLIFTTTRSGRISRGATALPPGPPRLPIIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNIISNILFSVDLGSYNAK 205          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28
Identity = 62/198 (31.31%), Postives = 110/198 (55.56%), Query Frame = 3
Query:   78 WLLFSWILVVA---LNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA---GTAIHIGQAAFGTTLNLISNTIFSIDLADPTSK 653
            ++ FS I+++    L +  +     S + PPGP   P+ GN+ ELG +P+K +A L + +GP++ LK G   T+V  +A  ++E+ +N D SF NR IPD   AH +++  +   P    WR  R+IC    F  +++   + +RRK + ++L ++++   +   G+ I + +  F  + N++ N I S DLAD  S+
Sbjct:    7 YVFFSAIIILPAFILFFSQKNTTKSSYKFPPGPPGLPIFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANSAEKGSGIEVTRFVFLASFNMLGNLILSKDLADLESE 204          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24
Identity = 60/158 (37.97%), Postives = 97/158 (61.39%), Query Frame = 3
Query:   54 MDMVSCVPW-LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDL 524
            M+++S + + ++FS++L   L  F R  K     LPPGP P+P+IGNL+ LG KPH+S A +A+ +GP+M LK G V  VV +SA++A + L+  D +F +R          ++   + + P    WR LRKIC+ H FS++ LD  +H+R+ +++ L
Sbjct:    1 MEILSLILYTVIFSFLLQFILRSFFR--KRYPLPLPPGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTL 156          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 58/188 (30.85%), Postives = 108/188 (57.45%), Query Frame = 3
Query:   93 WILVVALNYFS-----RGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH--GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDL 635
            W ++VA  +FS     R  +   + LPPGP   P+IGNL +LG KPH+S+ KL++ +GP+MSLKFG V+TVV S+    KE+L+  D   C+R  P+  Y     ++   + + P +  WR +RK+     ++++++ + QH R++++  L+ ++++       +++ +     + ++I    F I+L
Sbjct:    4 WYIIVAFVFFSSMIIVRIIRKTKKNLPPGPPRLPIIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSR--PNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLSGSVICRVAFGINL 189          
The following BLAST results are available for this feature:
BLAST of FC930280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
C76B1_HELTU5.614e-5051.277-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C3_ARATH1.028e-3544.31Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH5.101e-3540.00Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C80B1_ESCCA1.814e-3237.93(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C76C2_ARATH5.279e-3237.89Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C80B2_ESCCA6.894e-3235.64(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C76C1_ARATH3.421e-3136.41Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76A2_SOLME4.624e-2831.31Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
F3PH_PETHY4.051e-2437.97Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71BC_ARATH1.539e-2330.85Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC34005G04EF PostHarvC1 Citrus clementina cDNA clone C34005G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930280 ID=FC930280; Name=FC930280; organism=Citrus clementina; type=EST; length=721bp
ACACCTGAATTTGGTGTTTACAAGAGCTTCAACAAAAGAGAGCGAGATTA
AAGATGGATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTT
GGTCGTCGCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAA
GGCTTCCACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAA
CTCGGCGACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGG
CCCCATAATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTT
CTGCAGCCATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGT
AATCGAACGATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGG
GATGCCCTGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATAT
GCAACTCACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCTT
CGGCGTAAGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCCG
TGCAGGTACAGCAATACATATTGGCCAAGCTGCTTTCGGCACTACGCTTA
ATTTGATATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATCA
AAACTGCGCGAGAGTTTAAGCAAACAATTGGGGTATGATGGAAGAGCTGG
AAAGCTACTTTGTCGATTTTT
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