FC930283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: FAD5B_DICDI (Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 212 KYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYYVQDFEVSEISKDYRRLYIE 490 K T +E+ HN+ DLWI + GKVY++T+W HPGG+ LL AG+D T+ F +YHP T DK ++ ++ +E+ IS Y+E Sbjct: 13 KLYTWDEVSKHNQKNDLWIIVDGKVYNITKWVPLHPGGEDILLLSAGRDATNLFESYHPMT-----DKHYS--LIKQYEIGYISSYEHPKYVE 98
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12 Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 2 Query: 197 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAF-IAYHPGTAWQYLDKLFTGYYVQDFEVSEISKDYRRLYI 487 M +++K ++ EE+ HNK +D W+ I GKVYDVT + HPGGD LL+ G+D T+ F H TA +DK F G E+ S R Y+ Sbjct: 1 MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIG------EIDSSSVPATRTYV 92
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: FADS2_DANRE (Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 48/156 (30.77%), Postives = 77/156 (49.36%), Query Frame = 2 Query: 221 TAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYYVQDFEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCES-----VWAHLGSGMLLGFLWIQVLMLVTI 673 T EE++ H K D W+ ++ KVY+V++W K+HPGG L + AG+D T+AF A+HP Q + K + + E SE S+D ++ ++ C T L F + + +L E+ VW + G+G WI L++ I Sbjct: 22 TWEEVQKHTKHGDQWVVVERKVYNVSQWVKRHPGGLRILGHYAGEDATEAFTAFHPNL--QLVRKYLKPLLIGELEASEPSQDRQKNAALVEDFRALRERLEAEGCFKT-QPLFFALHLGHILLLEAIAFMMVW-YFGTG------WINTLIVAVI 167
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: FADS2_PONAB (Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 182 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYYV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSGMLLGFLWIQVLM 661 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F K HV F++++ ++ ES+ W + G+G WI L+ Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNG------WISTLI 163
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: FADS2_MACFA (Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 34/96 (35.42%), Postives = 54/96 (56.25%), Query Frame = 2 Query: 182 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYYVQDFEVSEISKD 469 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP D F G +++ + E++ + Sbjct: 9 EGAAEREVPMPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSTQHPGGQRVIGHYAGEDATDAFRAFHP-------DLKFVGKFLKPLLIGELAPE 97
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 39/89 (43.82%), Postives = 50/89 (56.18%), Query Frame = 2 Query: 197 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAF-IAYHPGTAWQYLDKLFTGYYVQDFEVSEI 460 M E K T E+ HN A+D W+ I GKVYDVT++ HPGGD LL+ G+D TD F H +A LD+ YYV D + + I Sbjct: 1 MGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDE----YYVGDIDSATI 85
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 197 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAF-IAYHPGTAWQYLDKLFTGYYVQDFEVSEI 460 M +EKK + EE+ HNK +D W+ I GKVYDVT + HPGGD LL+ G+D T+ F H TA ++K YY+ + + S + Sbjct: 1 MASEKKVLGFEEVSQHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEK----YYIGEIDSSTV 85
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: FADS2_HUMAN (Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 182 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYYV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV 604 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F K HV F++++ ++ ES+ Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLF-KTNHV----------FFLLLLAHIIALESI 146
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: FAD5A_DICDI (Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum GN=fadA PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 2 Query: 212 KYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHP 388 K + EL HN D W+++ GKVYD+T W HPGG LL AG+DVT+ F +YHP Sbjct: 14 KQYSWSELAKHNTENDCWVAVDGKVYDITRWVPLHPGGKEVLLLAAGRDVTNLFESYHP 72
BLAST of FC930283 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 212 KYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAY-HPGTAWQYLDKLFTGYYVQDFEVSEI 460 K T E+ HN ++D W+ I GKVYDVT++ + HPGGD LL+ G+D TD F H +A LD+ YYV D + S I Sbjct: 3 KIFTLAEVAQHNNSKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDE----YYVGDIDSSSI 82 The following BLAST results are available for this feature:
BLAST of FC930283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930283 ID=FC930283; Name=FC930283; organism=Citrus clementina; type=EST; length=684bpback to top |