FC930314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCL11_ARATH (Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=2 SV=2) HSP 1 Score: 371.703 bits (953), Expect = 1.884e-102 Identity = 181/204 (88.73%), Postives = 194/204 (95.10%), Query Frame = 3 Query: 54 MIYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 MIYTAIDNFYL+DEQLK SPSRKDGIDE TE +LRIYGCDLIQE GILLKLPQAVMATGQVLF RFYCK+S A+FDVKIVAAS VWLASKLEE+P+KARQVIIVFHRMECRRE LP+EHLD+++KKFSELK+E+SRTERHILKEMGFVCHVEHPHKFISNYLATLETP ELRQEAWNLANDSLRTTLCVR +SEVVACGVVYAA Sbjct: 1 MIYTAIDNFYLSDEQLKASPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENLPLEHLDMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTTLCVRFRSEVVACGVVYAA 204
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCL11_ORYSJ (Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 1.070e-97 Identity = 172/204 (84.31%), Postives = 188/204 (92.16%), Query Frame = 3 Query: 54 MIYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 MIYTAID FYLTDEQL+DSPSRKDGIDEATET LR+YGCDLIQESGILLKLPQAVMAT QVLFHRFYCK+SF RF VK VAAS VWLA KLEESPR+++ +IIVFHRMECRRE +PIEHLD+FSKK+S+LK ++ RTERH+LKEMGF+CHVEHPHKFISNYLATLE P EL QEAWNLANDSLRTTLCVR +SEVVACGVVYAA Sbjct: 1 MIYTAIDTFYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVFSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEAP-ELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAA 203
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL1_RAT (Cyclin-L1 OS=Rattus norvegicus GN=Ccnl1 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.766e-45 Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 3 Query: 69 IDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 ID+ + +E+L +PS +DG+D +ET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH + R G + + + K ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLRT + VR Q E +AC +Y A Sbjct: 55 IDHSVIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLR-GKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLA 254
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL1_MOUSE (Cyclin-L1 OS=Mus musculus GN=Ccnl1 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.766e-45 Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 3 Query: 69 IDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 ID+ + +E+L +PS +DG+D +ET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH + R G + + + K ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLRT + VR Q E +AC +Y A Sbjct: 60 IDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLR-GKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLA 259
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL1_HUMAN (Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.766e-45 Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 3 Query: 69 IDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 ID+ + +E+L +PS +DG+D +ET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH + R G + + + K ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLRT + VR Q E +AC +Y A Sbjct: 54 IDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLR-GKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLA 253
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL1_DANRE (Cyclin-L1 OS=Danio rerio GN=ccnl1 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.612e-45 Identity = 95/207 (45.89%), Postives = 133/207 (64.25%), Query Frame = 3 Query: 57 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRME--CRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 ++ AIDN + +++L +PS DG+D TET LRI GC+ IQ +GILL+LPQ MATGQV+F RF+ +SF + + +IVA + V LASK+EESPR+ R VI VFH ++ ++ P+ + + + K ++ + ER ILKE+GF HV+HPHK I YL LE L Q AWN ND+LRT+ VR + E +AC +Y A Sbjct: 30 VFLAIDNSIIPEDRLSTTPSMLDGLDHETETDLRILGCERIQSAGILLRLPQVAMATGQVIFQRFFFSKSFVKHNFEIVAMACVNLASKIEESPRRVRDVINVFHHLKQGKGKKSTPL----ILDQNYINTKNQVIKAERRILKELGFCVHVKHPHKIIVMYLQVLECEKNQMLVQTAWNYMNDALRTSAFVRFEPETIACACIYLA 232
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL2_MOUSE (Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.047e-45 Identity = 96/205 (46.83%), Postives = 132/205 (64.39%), Query Frame = 3 Query: 57 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 + ++N L D++L+ +PS G+D TET LR+ GC+LIQ +GILL+LPQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+ RE L + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLRT + VR Q E +AC +Y A Sbjct: 43 VLITLENCLLPDDKLRFTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPL-VLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLA 246
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL2_RAT (Cyclin-L2 OS=Rattus norvegicus GN=Ccnl2 PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.051e-44 Identity = 96/205 (46.83%), Postives = 132/205 (64.39%), Query Frame = 3 Query: 57 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 + ++N L D++L+ +PS G+D TET LR+ GC+LIQ +GILL+LPQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+ RE L + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLRT + VR Q E +AC +Y A Sbjct: 43 VLITLENCLLPDDKLRFTPSMSSGLDIDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPL-VLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLA 246
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL2_HUMAN (Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.793e-44 Identity = 95/206 (46.12%), Postives = 133/206 (64.56%), Query Frame = 3 Query: 57 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRM-ECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 + ++N L D++L+ +PS G+D TET LR+ GC+LIQ +GILL+LPQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+ + R + P+ L + + LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q +WN NDSLRT + VR Q E +AC +Y A Sbjct: 45 VLITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPL--LLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLA 248
BLAST of FC930314 vs. ExPASy Swiss-Prot
Match: CCNL1_XENLA (Cyclin-L1 OS=Xenopus laevis GN=ccnl1 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.793e-44 Identity = 95/208 (45.67%), Postives = 129/208 (62.02%), Query Frame = 3 Query: 57 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFH---RMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRXQSEVVACGVVYAA 665 +Y ID + +E+L +PS DG+D TET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +I+A + + LASK+EE+PR+ R VI V H ++ +R P+ + + + K + + ER ILKE+GF HV+HPHK I YL LE L Q AWN ND LRT + VR +E +AC +Y A Sbjct: 30 VYLTIDYSLIPEERLSPTPSMSDGLDLNTETDLRILGCELIQSAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIIAMACINLASKIEEAPRRIRDVINVCHHLRQIRAKRTPSPL----ILDQSYINTKNHVIKAERRILKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDCLRTNVFVRFDAETIACACIYLA 233 The following BLAST results are available for this feature:
BLAST of FC930314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930314 ID=FC930314; Name=FC930314; organism=Citrus clementina; type=EST; length=667bpback to top |