FC930328

Overview
NameFC930328
Unique NameFC930328
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930328_ssr121 microsatellite FC930328_ssr121:121..130. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15141 contig Ccv1_Contig15141:1..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT_POPTM (Caffeoyl-CoA O-methyltransferase OS=Populus tremuloides PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.012e-60
Identity = 106/134 (79.10%), Postives = 126/134 (94.03%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+C+KE+RE+T KHPW+ M T+ DE QFL+MLLKL+NAKNTMEIGV+TGYSLLATALAIP+DGKILA+DI +E+YE GLP+IQKAGVAHKIDF+EGPALP+LDQ+I+D KYHG+FDF+FVDA
Sbjct:   31 QYILETSVYPREPECMKELREVTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDA 164
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT2_POPTR (Caffeoyl-CoA O-methyltransferase 2 OS=Populus trichocarpa GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.167e-59
Identity = 106/134 (79.10%), Postives = 125/134 (93.28%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+C+KE+RELT KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGVFTGYSLLATALAIP+DGKILA+DI +E+YE GLP+IQKAG+ HKI+F+EGPALP+LDQ+I+D KYHGT+DF+FVDA
Sbjct:   31 QYILETSVYPREPECMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVFTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGLEHKIEFKEGPALPVLDQMIEDGKYHGTYDFIFVDA 164
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT_VITVI (Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.525e-59
Identity = 107/134 (79.85%), Postives = 125/134 (93.28%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+ +KE+RELT +HPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALA+PDDGKILA+DI KE+YE GLP+IQKAGVAHKIDF+EGPALP+LDQ+I+D KYHG+FDF+FVDA
Sbjct:   26 QYILETSVYPREPESMKELRELTAQHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINKENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDA 159
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT2_EUCGL (Caffeoyl-CoA O-methyltransferase 2 OS=Eucalyptus globulus GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.396e-59
Identity = 106/134 (79.10%), Postives = 125/134 (93.28%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALA+PDDGKILA+DI +E++E GLP+I+KAG+AHKIDFREGPALPLLDQL+QDEK HGT+DF+FVDA
Sbjct:   31 QYILETSVYPREPESMKELREITAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENFEIGLPVIEKAGLAHKIDFREGPALPLLDQLVQDEKNHGTYDFIFVDA 164
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT1_POPTR (Caffeoyl-CoA O-methyltransferase 1 OS=Populus trichocarpa GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.436e-59
Identity = 105/134 (78.36%), Postives = 125/134 (93.28%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+C+KE+RE+T KHPW+ M T+ DE QFL+MLLKL+NAKNTMEIGV+TGYSLLATALAIP+DGKILA+DI +E+YE GLP+IQKAGVAHKIDF+EGPALP+LDQ+I+D K HG+FDF+FVDA
Sbjct:   31 QYILETSVYPREPECMKELREVTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKCHGSFDFIFVDA 164
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT_SOLTU (Caffeoyl-CoA O-methyltransferase OS=Solanum tuberosum GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.566e-59
Identity = 104/134 (77.61%), Postives = 125/134 (93.28%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGVFTGYSLLATA+A+PDDGKILA+DI +E+YE GLP+I+KAG+AHKIDFREGPALP+LDQ+I+D KYHG++DF+FVDA
Sbjct:   26 QYILETSVYPREPEAMKELREITAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPVIEKAGLAHKIDFREGPALPVLDQMIEDGKYHGSYDFIFVDA 159
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT_PETCR (Caffeoyl-CoA O-methyltransferase OS=Petroselinum crispum PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.882e-59
Identity = 106/134 (79.10%), Postives = 123/134 (91.79%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALA+PDDGKILA+DI +E+YE GLPII+KAGV HKIDFREGPALP+LD +++D KYHGTFDFVFVDA
Sbjct:   25 QYILETSVYPREPEAMKELREVTAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEIGLPIIEKAGVGHKIDFREGPALPVLDHMLEDGKYHGTFDFVFVDA 158
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT_ZINEL (Caffeoyl-CoA O-methyltransferase OS=Zinnia elegans GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.291e-58
Identity = 107/134 (79.85%), Postives = 124/134 (92.54%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREPQ +KE+R +T KHPW+ M T+ DE QFL++LLKLINAKNTMEIGV+TGYSLL+TALA+P+DGKILALDI +E+YE GLPIIQKAGVAHKIDFREGPALPLLDQ++QDEK HG+FDF+FVDA
Sbjct:   29 QYILETSVYPREPQPMKELRRITAKHPWNLMTTSADEGQFLNLLLKLINAKNTMEIGVYTGYSLLSTALALPEDGKILALDINRENYEIGLPIIQKAGVAHKIDFREGPALPLLDQMLQDEKCHGSFDFIFVDA 162
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT5_TOBAC (Caffeoyl-CoA O-methyltransferase 5 OS=Nicotiana tabacum GN=CCOAOMT5 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.291e-58
Identity = 106/134 (79.10%), Postives = 125/134 (93.28%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALAIPDDGKILA+DI +E+YE GLPII+KAGVAHKI+FREGPALP+LDQL++D+K HGT+DF+FVDA
Sbjct:   24 QYILETSVYPREPESMKELREVTAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALAIPDDGKILAMDINRENYEIGLPIIEKAGVAHKIEFREGPALPVLDQLVEDKKNHGTYDFIFVDA 157
[Close]
BLAST of FC930328 vs. ExPASy Swiss-Prot
Match: CAMT2_TOBAC (Caffeoyl-CoA O-methyltransferase 2 OS=Nicotiana tabacum GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.405e-58
Identity = 105/134 (78.36%), Postives = 124/134 (92.54%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 666
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFLSMLLKLINAKNTMEIGVFTGYSLLATA+A+PDDGKILA+DI +E+YE GLPII+KAG+AHKI FREGPALP+LDQ+I+D KYHG++DF+FVDA
Sbjct:   26 QYILETSVYPREPEPMKELREITAKHPWNLMTTSADEGQFLSMLLKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPIIEKAGLAHKIVFREGPALPVLDQMIEDGKYHGSYDFIFVDA 159
The following BLAST results are available for this feature:
BLAST of FC930328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT_POPTM4.012e-6079.10Caffeoyl-CoA O-methyltransferase OS=Populus tremul... [more]
CAMT2_POPTR1.167e-5979.10Caffeoyl-CoA O-methyltransferase 2 OS=Populus tric... [more]
CAMT_VITVI1.525e-5979.85Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera... [more]
CAMT2_EUCGL3.396e-5979.10Caffeoyl-CoA O-methyltransferase 2 OS=Eucalyptus g... [more]
CAMT1_POPTR4.436e-5978.36Caffeoyl-CoA O-methyltransferase 1 OS=Populus tric... [more]
CAMT_SOLTU7.566e-5977.61Caffeoyl-CoA O-methyltransferase OS=Solanum tubero... [more]
CAMT_PETCR9.882e-5979.10Caffeoyl-CoA O-methyltransferase OS=Petroselinum c... [more]
CAMT_ZINEL1.291e-5879.85Caffeoyl-CoA O-methyltransferase OS=Zinnia elegans... [more]
CAMT5_TOBAC1.291e-5879.10Caffeoyl-CoA O-methyltransferase 5 OS=Nicotiana ta... [more]
CAMT2_TOBAC6.405e-5878.36Caffeoyl-CoA O-methyltransferase 2 OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionC34006C07EF PostHarvC1 Citrus clementina cDNA clone C34006C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930328 ID=FC930328; Name=FC930328; organism=Citrus clementina; type=EST; length=666bp
GATGGTATTCTGTAAGTAATGCCTGCGAATCGGGAAGGTCAGGAGGAAAA
CAAGGATCGTTACTACAAAACTCTACATGGGAACAAGACCCTTTTACAGA
GTGAAAAACTTTATGAGGTGTATATATATACATACAAATTAAAACTACAC
ACTCTTTTTAATTTTCTGTTTCTTTAATTTAACTAAAATGTAGAATGGAA
TGTCTCAATTATGCCGGCTATTATAATTTCTCTATCTTGATTTCTTCTTA
TTAATTATATCTTGCAGTATATACTTGAAACCAGTGTATATCCAAGAGAA
CCACAATGCTTGAAGGAGATCCGCGAGTTGACGGACAAGCATCCATGGAG
CGCCATGATGACTGCACCTGATGAAGCACAATTTTTGAGCATGCTACTCA
AGCTTATCAATGCCAAGAATACCATGGAAATTGGCGTTTTCACTGGTTAC
TCTCTCCTAGCCACTGCCCTCGCCATTCCCGACGATGGCAAGATACTGGC
CCTGGACATCACCAAGGAACACTACGAGAAGGGTCTCCCTATAATTCAAA
AAGCTGGTGTTGCCCACAAGATTGATTTCAGAGAAGGCCCTGCTCTTCCT
CTTCTTGATCAATTGATCCAAGACGAAAAATATCATGGGACATTCGACTT
CGTCTTTGTTGATGCT
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