FC930332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 1.061e-101 Identity = 194/215 (90.23%), Postives = 194/215 (90.23%), Query Frame = 1 Query: 67 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDD SPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFS LFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP Sbjct: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 215
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.431e-63 Identity = 131/218 (60.09%), Postives = 152/218 (69.72%), Query Frame = 1 Query: 67 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAD---DDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 MASIS NQ PCKTL +++ TSK S LP++S + +S++ FT +P +A + +D PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFS LFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSP Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSP 218
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.268e-62 Identity = 131/218 (60.09%), Postives = 151/218 (69.27%), Query Frame = 1 Query: 67 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAD---DDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 MASIS NQ PCKTL +++ TSK S LP++S +S++ FT +P +A + +D PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFS LFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSP Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSP 218
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.655e-62 Identity = 131/216 (60.65%), Postives = 155/216 (71.76%), Query Frame = 1 Query: 67 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPLVLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 MA +SQ NQ PCKTL+ NPP Q TSKPS+ P+ S+ +R+ A KS +S++ + R ++ +D P E +EI LKKALVDSFYGTDRGL + +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+ LFPLLSR LPL +VEEISQTIDSEN TVQNS+QF+GPLATTSI+TNAKFEVRSP Sbjct: 1 MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAVLNDDEWGEDKDEKYGDDSSVAVAEKEEE-KPLEPSEIYKLKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSR-NLPLVKVEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSP 214
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.129e-53 Identity = 117/217 (53.92%), Postives = 148/217 (68.20%), Query Frame = 1 Query: 67 MASISQTNQFPCKTLSQNPPHNQFTSKP--SILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 MA++ NQFPCKT Q+ +++ SKP S++P++++ S F + R R + A+D+ E TE+ LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL YTSF LFPLLSRG +PL +V+EISQTIDS+NFTV+NS+ FAGPLATTSISTNAKFE+RSP Sbjct: 1 MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSALTRRPSFPPGEFAVSRSDFRVRVI----DAEDELDPETSEGGGSALLMAEEAIESVEETEV--LKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSP 211
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.717e-51 Identity = 114/216 (52.78%), Postives = 145/216 (67.13%), Query Frame = 1 Query: 67 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 MA++ + QF C+T P+++ SKP L P+ S+ I R + +++ R + RA D ++V E + LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF +LFPLLSRG +PL +V+EISQTIDS+NFTVQNS++FAGPL T SISTNAKFE+RSP Sbjct: 1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRVFKVRATDTGEIGSALLAAEEAI---------EDVEETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSP 202
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.522e-51 Identity = 113/219 (51.60%), Postives = 140/219 (63.93%), Query Frame = 1 Query: 67 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDXXXXXXXXXXXXXXXXXXXXSPK---EVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 MA++ QFPCKTL+ + + + SK P +LP+NS+ + G + RP RA D D + K V E + LK++L DS YGTDRGL+ +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF LFPLLSR PL +V+EISQTIDS++FTVQNS++FAGP +TTS STNAKFE+RSP Sbjct: 1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSINRRSEI---------GVSVHRPDFKIRATDIDDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSP 210
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.566e-47 Identity = 95/123 (77.24%), Postives = 108/123 (87.80%), Query Frame = 1 Query: 346 TEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLP-LARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 +E+ LK L ++ YGT+RGL A+SETRAE+VELITQLEA+NPTPAPTEALTLLN KWIL YTSFS LFPLL G+LP L +VEEISQTIDSENFTVQN I+F+GPLATTS+STNAKFEVRSP Sbjct: 90 SEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSP 212
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.837e-46 Identity = 107/211 (50.71%), Postives = 130/211 (61.61%), Query Frame = 1 Query: 88 NQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRAR--PLVLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 +QF CKT + + F SK P +LP+N + ++ + F P R D D + + E + LK+ L S YGTDRGL+A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILVYTSF LFPLLSR PL +V+EISQTIDS++FTV NS++FA PLATTS+STNAKFEVRSP Sbjct: 9 SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFKVRASDVNDEWGPDSKGRGGDVDDEWGPEIGLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSP 219
BLAST of FC930332 vs. ExPASy Swiss-Prot
Match: PG1_PEA (Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.860e-32 Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 352 IDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSSLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 711 ++ LK++LVD+ YGT+ G A SE RAE+ E + QLEA NPTPAP E LLN W+L+YT+ S L PLL+ G+LPL ++++ISQTID+++FTV NS + P A+ S S +A FEVRSP Sbjct: 132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSP 251 The following BLAST results are available for this feature:
BLAST of FC930332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930332 ID=FC930332; Name=FC930332; organism=Citrus clementina; type=EST; length=713bpback to top |