FC930341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.312e-65 Identity = 126/149 (84.56%), Postives = 135/149 (90.60%), Query Frame = 2 Query: 191 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 M K +KAEKKIAYDAKLC L+EEY QILV +DNVGSNQL NIR+GL GDSVVLMGKNTMMKR++RMHAEKTGN A+LNLIPLL GNVGLIFTKGDLKEV +EVAKYKVGAPARVGLVAPIDVVVPPGNTGLD SQTSF QVL+IPTK Sbjct: 1 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 149
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 2.237e-65 Identity = 124/148 (83.78%), Postives = 136/148 (91.89%), Query Frame = 2 Query: 194 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 +VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QL NIR+GL GDSVVLMGKNTMMKR++R+H+E TGNTA LNL+PLL GNVGLIFTKGDLKEV +EVAKYKVGAPARVGLVAPIDVVV PGNTGLD SQTSF QVL+IPTK Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTK 148
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 4.984e-65 Identity = 124/149 (83.22%), Postives = 136/149 (91.28%), Query Frame = 2 Query: 191 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 M VKA+KAEKKI YD+KLCQLL EY+QILV AADNVGS QL NIR+GL GDSVVLMGKNTMMKR++R+HA+KTGN AFL+L+PLL GNVGLIFTKGDLKEV +EVAKYKVGAPARVGLVAPIDVVV PGNTGLD SQTSF QVL+IPTK Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTK 149
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 6.509e-65 Identity = 123/148 (83.11%), Postives = 136/148 (91.89%), Query Frame = 2 Query: 194 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 +VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QL NIR+GL GDSVVLMGKNTMMKR++R+H+E +GNTA LNL+PLL GNVGLIFTKGDLKEV +EVAKYKVGAPARVGLVAPIDVVV PGNTGLD SQTSF QVL+IPTK Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTK 148
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 7.197e-64 Identity = 125/149 (83.89%), Postives = 133/149 (89.26%), Query Frame = 2 Query: 191 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 M KA+KAEKKI YD KLCQLL+EYTQILV ADNVGS QL NIR+GL GDSVVLMGKNTMMKR++R+HAEKTGN AFLNLIPLL GNVGLIFTKG LKEV +EVAKYKVGAPA VGLVAPIDVVVPPGNTGLD SQTSF QVL+IPTK Sbjct: 1 MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 149
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 5.157e-62 Identity = 114/149 (76.51%), Postives = 134/149 (89.93%), Query Frame = 2 Query: 191 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 M +K +KAEKK+AYD KLCQLL+EYT++L+A ADNVGSNQL IR+GL GDS+VLMGKNT+++R I++HA+ TGN FL L+PLL GNVGLIFTKGDLKEV++EVAKYKVGAPARVGLVAP+DVVVPPGNTGLD SQTSF QVL+IPTK Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTK 149
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 1.834e-59 Identity = 114/149 (76.51%), Postives = 132/149 (88.59%), Query Frame = 2 Query: 191 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 M +K +KAEKKIAYD KLC LL+EYT++L+A ADNVGS QL +IRRGL GDSVVLMGKNT+++R I+++AEKTGN F L+ LL GNVGLIFTKGDLKEV++EVAKYKVGAPARVGLVAP+DVVVPPGNTGLD SQTSF QVL+IPTK Sbjct: 1 MAIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTK 149
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 5.901e-58 Identity = 112/149 (75.17%), Postives = 128/149 (85.91%), Query Frame = 2 Query: 191 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 M VK +KAEKKIAYD KLCQLL+EY+Q+L+A+ADNVGSNQL IR GL GDS+VLMGKNTMMKR+IR+HAE TGN N+ L NVGLIFTKGDL +V++E++KYKVGAPAR GLVAPIDVVVPPGNTGLD SQTSF QVL+IPTK Sbjct: 1 MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 149
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.761e-34 Identity = 74/148 (50.00%), Postives = 97/148 (65.54%), Query Frame = 2 Query: 194 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 +V+ +KA K Y K+ +L +EY + + ADNVGS Q+ NIR L G VVLMGKNTMM++ IR H E N L+P + GNVG +FTKGDL EV+ ++ + KV APAR G +AP+ V++P NTGL +TSF Q L IPTK Sbjct: 1 MVRENKAAWKAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAIRGHLEN--NAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTGLGPEKTSFFQALSIPTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.852e-33 Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 2 Query: 194 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 +V+ +KA K Y K+ +L +E+ + + ADNVGS Q+ NIR L G +VVLMGKNTMM++ IR H E N L+P + GNVG +FTKGDL EV+ ++ + KV APAR G +AP+ V++P NTGL +TSF Q L IPTK Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTK 146 The following BLAST results are available for this feature:
BLAST of FC930341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930341 ID=FC930341; Name=FC930341; organism=Citrus clementina; type=EST; length=639bpback to top |