FC930347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: SFRS7_MOUSE (Splicing factor, arginine/serine-rich 7 OS=Mus musculus GN=Sfrs7 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.949e-20 Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 85 DKMSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSHNXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 408 D ++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK + RVELS + +CYECGE GH+A +C Sbjct: 37 DSETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 148
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: SFRS7_HUMAN (Splicing factor, arginine/serine-rich 7 OS=Homo sapiens GN=SFRS7 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.580e-20 Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 94 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSHNXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 408 ++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK + RVELS + +CYECGE GH+A +C Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: SFRS7_BOVIN (Splicing factor, arginine/serine-rich 7 OS=Bos taurus GN=SFRS7 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.580e-20 Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 94 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSHNXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 408 ++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK + RVELS + +CYECGE GH+A +C Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: RSP6_CAEEL (Probable splicing factor, arginine/serine-rich 6 OS=Caenorhabditis elegans GN=rsp-6 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 94 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELS 297 ++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG RVELS Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARVELS 74
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: SFRS3_MOUSE (Splicing factor, arginine/serine-rich 3 OS=Mus musculus GN=Sfrs3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.418e-14 Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 97 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELSH 300 +VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+ RVELS+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 82
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: SFRS3_HUMAN (Splicing factor, arginine/serine-rich 3 OS=Homo sapiens GN=SFRS3 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.418e-14 Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 97 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELSH 300 +VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+ RVELS+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 82
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: SFRS3_BOVIN (Splicing factor, arginine/serine-rich 3 OS=Bos taurus GN=SFRS3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.418e-14 Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 97 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELSH 300 +VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+ RVELS+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 82
BLAST of FC930347 vs. ExPASy Swiss-Prot
Match: RBP1_DROME (RNA-binding protein 1 OS=Drosophila melanogaster GN=Rbp1 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 4.124e-14 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 85 DKMSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 270 D +VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG Sbjct: 8 DLACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69 The following BLAST results are available for this feature:
BLAST of FC930347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930347 ID=FC930347; Name=FC930347; organism=Citrus clementina; type=EST; length=645bpback to top |