FC930357

Overview
NameFC930357
Unique NameFC930357
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15110 contig Ccv1_Contig15110:104..798. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 2
Query:  233 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFXNNAQQSSFVNE 694
            E+ CPFC+EDFD+VGLCCHIDEEHPVEAK+GVCPVC  RV +D+V HITTQH N      + +L +G  +ST  +L+KEL+ A+ QSLL              DP L SF++N P+ ++S +      T   A  K S +++   + Q++    E
Sbjct:   46 EFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGE 200          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 68/158 (43.04%), Postives = 93/158 (58.86%), Query Frame = 2
Query:  233 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTA---DESESIQPALSTGEGAEDKSSCEKTFXNNAQQSSFVNE 694
            E+ CPFC+++FD+VGLCCHID  HPVEAK+GVCPVC  +V +D+V HITTQHGN+     + +L KG  +ST  +L+KEL+ A+ QS L              DP L SF++  P+A    E +S+            + S + T  +  QQ SF NE
Sbjct:   42 EFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQS-LGGSSTFIPSSNIDSDPLLSSFMFKPPSAIPITEGDSVA-----------QVSPKDTSKSKIQQESFSNE 187          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 67/157 (42.68%), Postives = 90/157 (57.32%), Query Frame = 2
Query:  233 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL---ARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFXNNAQQSSFVNE 694
            E+ CPFCS+ FD+V LCCHIDE+HP+EAK+GVCPVC  RV +DMV HIT QH NI     K K  +G S ST+S LR+E  + +FQSL    +             DP LS   + P AD   + +  +S   G   K++ +     NA+++S   E
Sbjct:   43 EFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFIS-PIADGFFTTESCISAETGPVKKTTIQCLPEQNAKKTSLSAE 198          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 68/171 (39.77%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  224 GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHK--GNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTADESESIQ-------------PALSTGEGAEDKSSCEKTFXNNAQQSSFV 688
            G   Y CPFC EDFD V  CCH+D+EH VEAKSGVCP+C TRV +D++ H+T QHG+      + ++ K    S+S +S LRK+L++   QS L              DP+L S I ++P A+ S+ +              P   T E AE   S EK     AQ+S FV
Sbjct:   50 GGEAYNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEPSKDLHSDSSDNNFLLNKFPDDKTAERAEPSLS-EKDQKERAQRSKFV 219          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI195_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana GN=DI19-5 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26
Identity = 61/136 (44.85%), Postives = 81/136 (59.56%), Query Frame = 2
Query:  233 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKS 640
            +YPCPFCS+D+DLV LC HIDEEH ++A +G+CPVC  RV M MVDHITTQH ++       +L+K  S S  S   ++    + QSL+              DP LSFIYN P+  +S+ +QP  S+    ED S
Sbjct:   42 DYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITTQHRDVFK-----RLYKDESYSAFSPGTRK----YLQSLIDEPLSTNHTSKSVLDPLLSFIYNPPSPKKSKLVQPDSSSEASMEDNS 168          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 2
Query:  233 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL--ARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKSSCEKT 655
            EY CPFCS+ FD+V LCCHIDE+HP++AK+GVCP+C  +V+ DM+ HIT QH N+     K K  +G + S +S L++E  + +FQSL                 DP LS   + P AD+       +S      D SS +KT
Sbjct:   43 EYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSMLSILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFIS-PMADDF-----FISESSLCADTSSAKKT 179          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 2
Query:  233 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL 499
            E+ CPFC+E +D++GLCCHID+EH +E+K+ VCPVC  +V +D+V HIT  HG++     K K  K  +NST+S LRKEL+    Q LL
Sbjct:   34 EFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKRKSRKSGTNSTLSLLRKELREGDLQRLL 122          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  233 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLA----RXXXXXXXXXXXXDPWL-SFIYNMPTADESESIQPALSTGEGA 628
            E+ CP+C ED D+V LC H++EEHP E  +  CP+C  ++  DM++HIT QHG +  +  +L+      +  +S L ++L+ AH Q LL     R            DP L SF  + PT+D  E+ +P +S  + A
Sbjct:   41 EFACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDA 177          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI192_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana GN=DI19-2 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18
Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 2
Query:  119 STSSSRNYQSTLKSQFAXXXXXXXXXXXXXXXXVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKS 640
            S+ SSR+Y+S   +++                 +    EYPCPFC+ D+DLV LC HIDEEH  EA +G+CPVC  RV M MVDHIT+ H ++  S  K   ++ +       L  +    H   L               D +LSFI N    ++++ + P  S     EDK+
Sbjct:   10 SSGSSRSYRSETAAKYQSGPYQDLEEFEEVDDDIA--VEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHHRDVLKSEQKEMSYRED-----PYLSDKYLQPHLDELPPSMNHHQHPSKHVSDQFLSFINNSALPNQTKLVLPDSS----VEDKN 172          
BLAST of FC930357 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16
Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 2
Query:  242 CPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL 499
            CP+C ED D+  LC H++E+HP E  +  CP+C  ++T DM++HIT QHG +  S  +++      +  +S L ++L++A  Q+LL
Sbjct:   64 CPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSGRRMRRFDIPESQALSLLSRDLRDAQLQALL 149          
The following BLAST results are available for this feature:
BLAST of FC930357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DI194_ARATH6.535e-3244.52Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabid... [more]
DI197_ARATH2.176e-2743.04Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabid... [more]
DI193_ARATH3.711e-2742.68Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabid... [more]
DI192_ORYSJ2.405e-2639.77Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza ... [more]
DI195_ARATH9.140e-2644.85Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabid... [more]
DI196_ARATH2.251e-2441.26Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabid... [more]
DI191_ARATH5.545e-2351.69Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thal... [more]
DI191_ORYSJ9.788e-2035.77Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa sub... [more]
DI192_ARATH1.413e-1833.33Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabid... [more]
DI193_ORYSJ6.566e-1638.37Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionC34006F07EF PostHarvC1 Citrus clementina cDNA clone C34006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930357 ID=FC930357; Name=FC930357; organism=Citrus clementina; type=EST; length=695bp
GGGGCTTAAATCAAAGGGGAAGCTTACTCGCTATTTTATGCTATCATCTG
AATTGGGTTTTGTTTGTGAATTTTAATTAACAGAAGATTCAATGGATTAC
AGTAGATACTTTGGTCTTTCTACTTCATCATCAAGGAACTATCAGTCAAC
TCTCAAGTCTCAGTTTGCGGATTTTTGCATTGATTTTGAGGATATAGAAG
AAGATGATTATGAGGAAGTGAAAGGAGAGTATGAGTATCCATGCCCATTT
TGTTCGGAGGATTTTGATTTAGTTGGATTATGCTGTCATATTGATGAGGA
ACATCCTGTTGAAGCAAAGTCGGGGGTATGCCCTGTTTGCGTTACAAGGG
TAACGATGGACATGGTTGATCACATAACAACACAACATGGAAACATTTCA
AATAGTTGGCACAAATTAAAACTTCATAAAGGCAACTCTAATTCAACTAT
ATCATCTTTGAGGAAAGAGTTGCAAAATGCACATTTTCAATCTCTTCTTG
CAAGGTCATCCTCTTCTGTTTCTTCCTCCAAAAAGACATCTGATCCATGG
CTATCATTTATTTACAACATGCCTACTGCTGACGAGTCTGAAAGCATACA
GCCTGCTTTGAGCACTGGAGAAGGAGCAGAAGATAAAAGCTCGTGTGAGA
AAACATTTNGAAACAATGCTCAGCAATCTTCCTTTGTCAACGAGG
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